Experiment: D-Mannose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21146 and SM_b21147 overlap by 1 nucleotides SM_b21147 and SM_b21148 are separated by 188 nucleotides SM_b21148 and SM_b21149 are separated by 12 nucleotides SM_b21149 and SM_b21150 overlap by 4 nucleotides
SM_b21146: SM_b21146 - choline uptake ABC transporter ATP-binding protein, at 890,750 to 891,688
_b21146
SM_b21147: SM_b21147 - choline uptake ABC transporter permease, at 891,688 to 892,425
_b21147
SM_b21148: SM_b21148 - oxidoreductase, at 892,614 to 893,774
_b21148
SM_b21149: SM_b21149 - sugar uptake ABC transporter permease, at 893,787 to 894,671
_b21149
SM_b21150: SM_b21150 - sugar uptake ABC transporter permease, at 894,668 to 895,525
_b21150
Position (kb) 892
893
894 Strain fitness (log2 ratio) -1
0
1 at 891.811 kb on + strand, within SM_b21147 at 891.915 kb on + strand, within SM_b21147 at 892.060 kb on + strand, within SM_b21147 at 892.060 kb on + strand, within SM_b21147 at 892.060 kb on + strand, within SM_b21147 at 892.491 kb on + strand at 892.662 kb on + strand at 892.662 kb on + strand at 892.663 kb on - strand at 892.704 kb on + strand at 892.770 kb on + strand, within SM_b21148 at 892.770 kb on + strand, within SM_b21148 at 892.854 kb on - strand, within SM_b21148 at 892.860 kb on - strand, within SM_b21148 at 893.004 kb on + strand, within SM_b21148 at 893.005 kb on - strand, within SM_b21148 at 893.077 kb on + strand, within SM_b21148 at 893.077 kb on + strand, within SM_b21148 at 893.077 kb on + strand, within SM_b21148 at 893.077 kb on + strand, within SM_b21148 at 893.077 kb on + strand, within SM_b21148 at 893.077 kb on + strand, within SM_b21148 at 893.078 kb on - strand, within SM_b21148 at 893.085 kb on + strand, within SM_b21148 at 893.085 kb on + strand, within SM_b21148 at 893.085 kb on + strand, within SM_b21148 at 893.086 kb on - strand, within SM_b21148 at 893.121 kb on + strand, within SM_b21148 at 893.130 kb on + strand, within SM_b21148 at 893.359 kb on - strand, within SM_b21148 at 893.380 kb on - strand, within SM_b21148 at 893.380 kb on - strand, within SM_b21148 at 893.545 kb on - strand, within SM_b21148 at 893.575 kb on - strand, within SM_b21148 at 893.848 kb on - strand at 893.882 kb on + strand, within SM_b21149 at 893.949 kb on + strand, within SM_b21149 at 894.159 kb on + strand, within SM_b21149 at 894.160 kb on - strand, within SM_b21149 at 894.160 kb on - strand, within SM_b21149 at 894.160 kb on - strand, within SM_b21149 at 894.162 kb on - strand, within SM_b21149 at 894.306 kb on + strand, within SM_b21149 at 894.307 kb on - strand, within SM_b21149 at 894.307 kb on - strand, within SM_b21149 at 894.307 kb on - strand, within SM_b21149 at 894.345 kb on + strand, within SM_b21149 at 894.346 kb on - strand, within SM_b21149 at 894.381 kb on + strand, within SM_b21149 at 894.382 kb on - strand, within SM_b21149 at 894.538 kb on - strand, within SM_b21149 at 894.538 kb on - strand, within SM_b21149 at 894.599 kb on + strand at 894.627 kb on + strand at 894.627 kb on + strand at 894.704 kb on + strand at 894.722 kb on + strand at 894.722 kb on + strand at 894.722 kb on + strand at 894.722 kb on + strand at 894.722 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Mannose (C) remove 891,811 + SM_b21147 0.17 -0.3 891,915 + SM_b21147 0.31 +0.1 892,060 + SM_b21147 0.50 +0.1 892,060 + SM_b21147 0.50 -0.3 892,060 + SM_b21147 0.50 +0.2 892,491 + +0.9 892,662 + +0.6 892,662 + +0.0 892,663 - -0.5 892,704 + +0.5 892,770 + SM_b21148 0.13 +0.1 892,770 + SM_b21148 0.13 +0.8 892,854 - SM_b21148 0.21 +1.0 892,860 - SM_b21148 0.21 +0.8 893,004 + SM_b21148 0.34 -1.3 893,005 - SM_b21148 0.34 -1.1 893,077 + SM_b21148 0.40 -0.0 893,077 + SM_b21148 0.40 +0.3 893,077 + SM_b21148 0.40 +0.1 893,077 + SM_b21148 0.40 -0.5 893,077 + SM_b21148 0.40 -0.4 893,077 + SM_b21148 0.40 +1.1 893,078 - SM_b21148 0.40 +0.3 893,085 + SM_b21148 0.41 +0.5 893,085 + SM_b21148 0.41 +0.6 893,085 + SM_b21148 0.41 -0.0 893,086 - SM_b21148 0.41 +0.4 893,121 + SM_b21148 0.44 +0.6 893,130 + SM_b21148 0.44 -0.1 893,359 - SM_b21148 0.64 -0.1 893,380 - SM_b21148 0.66 +0.6 893,380 - SM_b21148 0.66 -0.5 893,545 - SM_b21148 0.80 -1.2 893,575 - SM_b21148 0.83 -0.0 893,848 - +0.1 893,882 + SM_b21149 0.11 +1.4 893,949 + SM_b21149 0.18 -0.2 894,159 + SM_b21149 0.42 +0.0 894,160 - SM_b21149 0.42 +0.8 894,160 - SM_b21149 0.42 -1.6 894,160 - SM_b21149 0.42 -0.6 894,162 - SM_b21149 0.42 -0.8 894,306 + SM_b21149 0.59 -0.2 894,307 - SM_b21149 0.59 -0.2 894,307 - SM_b21149 0.59 +0.2 894,307 - SM_b21149 0.59 +0.6 894,345 + SM_b21149 0.63 +0.4 894,346 - SM_b21149 0.63 -1.2 894,381 + SM_b21149 0.67 -0.6 894,382 - SM_b21149 0.67 -0.5 894,538 - SM_b21149 0.85 -0.6 894,538 - SM_b21149 0.85 +0.4 894,599 + +1.0 894,627 + +0.4 894,627 + +0.0 894,704 + -0.2 894,722 + +0.6 894,722 + -0.2 894,722 + +0.2 894,722 + -0.2 894,722 + -0.1
Or see this region's nucleotide sequence