Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS09410

Experiment: Valeric (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Valeric (C)
1,994,345	+				+0.0
1,994,345	+				-0.1
1,994,345	+				+0.9
1,994,345	+				+0.2
1,994,345	+				+0.4
1,994,345	+				-1.1
1,994,345	+				-0.7
1,994,345	+				+0.6
1,994,345	+				+0.5
1,994,346	-				-0.1
1,994,346	-				-1.2
1,994,346	-				-0.4
1,994,346	-				+0.1
1,994,346	-				+0.3
1,994,346	-				-0.0
1,994,346	-				+0.3
1,994,347	+				-0.2
1,994,347	+				+0.3
1,994,347	+				-0.5
1,994,347	+				-0.9
1,994,347	+				-1.0
1,994,347	+				-0.2
1,994,347	+				+0.6
1,994,347	+				-0.6
1,994,347	+				+0.3
1,994,348	-				-1.2
1,994,348	-				+0.5
1,994,348	-				+0.3
1,994,348	-				-0.9
1,994,348	-				-1.0
1,994,393	-				+0.3
1,994,400	+				-1.7
1,994,423	+				+0.9
1,994,510	+				-0.4
1,994,511	-				-1.1
1,994,511	-				+0.6
1,994,521	+				-3.5
1,994,522	-				+0.9
1,994,558	-				-0.5
1,994,567	+				-0.5
1,994,568	-				+0.4
1,994,625	+				-0.1
1,994,625	+				+1.0
1,994,625	+				-0.2
1,994,625	+				-0.2
1,994,625	+				-0.1
1,994,625	+				-0.1
1,994,625	+				+0.2
1,994,625	+				-2.8
1,994,626	+				-0.7
1,994,626	-				-0.7
1,994,626	-				+1.3
1,994,626	-				+0.6
1,994,626	-				-0.6
1,994,629	+				-0.8
1,994,629	+				+0.4
1,994,629	+				-0.2
1,994,629	+				-1.1
1,994,629	+				+1.2
1,994,629	+				-0.7
1,994,633	+				-0.1
1,994,633	+				+0.4
1,994,634	-				-2.0
1,994,634	-				+0.4
1,994,722	+				+0.6
1,994,722	+				+1.3
1,994,723	-				+0.8
1,994,723	-				+0.1
1,994,754	+				+1.1
1,994,754	+				-0.1
1,994,754	+				-0.8
1,994,755	-				+1.1
1,994,755	-				-0.3
1,994,800	+				+1.4
1,994,801	-				+0.9
1,994,859	-				+0.1
1,994,859	-				-2.5
1,994,859	-				-1.5
1,994,862	+				-1.9
1,994,862	+				-2.3
1,994,862	+				-2.3
1,994,866	+				-1.5
1,994,866	+				-0.9
1,994,866	+				-1.5
1,994,866	+				-0.5
1,994,866	+				-0.2
1,994,866	+				-0.5
1,994,867	-				-1.5
1,994,867	-				+1.1
1,994,913	+				+0.7
1,994,944	-				-1.5
1,994,960	+				+0.5
1,994,960	+				-2.2
1,994,961	-				+0.1
1,994,967	+				-1.5
1,994,968	-				+0.3
1,994,968	-				-1.7
1,994,976	+				+1.1
1,994,976	+				+0.3
1,995,004	-				-0.0
1,995,075	+				-1.2
1,995,075	+				-1.1
1,995,075	+				-1.2
1,995,075	+				-1.7
1,995,179	+				+0.1
1,995,180	-				-0.1
1,995,180	-				+0.0
1,995,180	-				-0.2
1,995,186	+				+2.7
1,995,186	+				-2.3
1,995,186	+				+3.0
1,995,186	+				+1.4
1,995,186	+				-1.2
1,995,186	+				+1.7
1,995,187	-				+0.9
1,995,196	-				+0.1
1,995,478	-				+0.6
1,995,478	-				-0.4
1,995,478	-				+0.3
1,995,478	-				-0.1
1,995,763	+		ABZR87_RS09410	0.15	-0.3
1,995,959	+		ABZR87_RS09410	0.20	-0.4
1,996,032	+		ABZR87_RS09410	0.22	-0.2
1,996,032	+		ABZR87_RS09410	0.22	-0.0
1,996,032	+		ABZR87_RS09410	0.22	+1.6
1,996,033	-		ABZR87_RS09410	0.22	-0.1
1,996,080	+		ABZR87_RS09410	0.23	+0.0
1,996,081	-		ABZR87_RS09410	0.23	+1.1
1,996,081	-		ABZR87_RS09410	0.23	-0.0
1,996,092	+		ABZR87_RS09410	0.24	-0.3
1,996,093	-		ABZR87_RS09410	0.24	+0.7
1,996,300	-		ABZR87_RS09410	0.29	-2.0
1,996,300	-		ABZR87_RS09410	0.29	-0.3
1,996,599	+		ABZR87_RS09410	0.37	+0.7
1,996,599	+		ABZR87_RS09410	0.37	-0.0
1,996,600	-		ABZR87_RS09410	0.37	+0.6
1,996,600	-		ABZR87_RS09410	0.37	-0.8
1,996,600	-		ABZR87_RS09410	0.37	-0.8
1,996,653	+		ABZR87_RS09410	0.39	+0.3
1,996,654	-		ABZR87_RS09410	0.39	-0.9
1,996,654	-		ABZR87_RS09410	0.39	-0.5
1,996,654	-		ABZR87_RS09410	0.39	-1.0
1,996,654	-		ABZR87_RS09410	0.39	+0.2
1,996,654	-		ABZR87_RS09410	0.39	-0.4
1,996,654	-		ABZR87_RS09410	0.39	-0.3
1,996,654	-		ABZR87_RS09410	0.39	-2.1
1,996,758	+		ABZR87_RS09410	0.41	-1.1
1,996,759	-		ABZR87_RS09410	0.41	+0.5
1,996,759	-		ABZR87_RS09410	0.41	+0.4
1,996,790	+		ABZR87_RS09410	0.42	+0.9
1,996,790	+		ABZR87_RS09410	0.42	+0.5
1,996,855	-		ABZR87_RS09410	0.44	-0.4
1,996,855	-		ABZR87_RS09410	0.44	+0.8
1,997,230	+		ABZR87_RS09410	0.54	-1.3
1,997,231	-		ABZR87_RS09410	0.54	+0.6
1,997,321	+		ABZR87_RS09410	0.56	-0.7
1,997,321	+		ABZR87_RS09410	0.56	-0.1
1,997,321	+		ABZR87_RS09410	0.56	+0.5
1,997,321	+		ABZR87_RS09410	0.56	-0.1
1,997,321	+		ABZR87_RS09410	0.56	-0.1
1,997,321	+		ABZR87_RS09410	0.56	+0.6
1,997,322	-		ABZR87_RS09410	0.56	-1.0
1,997,322	-		ABZR87_RS09410	0.56	-0.1
1,997,322	-		ABZR87_RS09410	0.56	-0.4
1,997,322	-		ABZR87_RS09410	0.56	+1.0
1,997,322	-		ABZR87_RS09410	0.56	-1.1
1,997,420	+		ABZR87_RS09410	0.59	+1.0
1,997,420	+		ABZR87_RS09410	0.59	-1.6
1,997,420	+		ABZR87_RS09410	0.59	+3.2
1,997,420	+		ABZR87_RS09410	0.59	+0.1
1,997,420	+		ABZR87_RS09410	0.59	+1.9
1,997,420	+		ABZR87_RS09410	0.59	-2.5
1,997,421	-		ABZR87_RS09410	0.59	-0.5
1,997,421	-		ABZR87_RS09410	0.59	+3.5
1,997,421	-		ABZR87_RS09410	0.59	-1.2
1,997,514	+		ABZR87_RS09410	0.61	+0.7
1,997,514	+		ABZR87_RS09410	0.61	-2.7
1,997,780	+		ABZR87_RS09410	0.68	-0.2
1,997,780	+		ABZR87_RS09410	0.68	+0.3
1,997,939	+		ABZR87_RS09410	0.73	+0.1
1,997,939	+		ABZR87_RS09410	0.73	-1.9
1,997,939	+		ABZR87_RS09410	0.73	+1.1
1,997,939	+		ABZR87_RS09410	0.73	-0.4
1,997,939	+		ABZR87_RS09410	0.73	-1.3
1,997,939	+		ABZR87_RS09410	0.73	-0.2
1,997,939	+		ABZR87_RS09410	0.73	+0.5
1,997,939	+		ABZR87_RS09410	0.73	-0.5
1,997,940	-		ABZR87_RS09410	0.73	+0.6
1,997,940	-		ABZR87_RS09410	0.73	+0.9
1,997,940	-		ABZR87_RS09410	0.73	-2.3
1,997,940	-		ABZR87_RS09410	0.73	-0.0
1,997,940	-		ABZR87_RS09410	0.73	+0.2
1,997,940	-		ABZR87_RS09410	0.73	-0.2
1,997,940	-		ABZR87_RS09410	0.73	-0.0
1,997,941	-		ABZR87_RS09410	0.73	-1.2
1,998,156	+		ABZR87_RS09410	0.78	+0.3
1,998,156	+		ABZR87_RS09410	0.78	-1.5
1,998,156	+		ABZR87_RS09410	0.78	+0.5
1,998,156	+		ABZR87_RS09410	0.78	+2.7
1,998,157	-		ABZR87_RS09410	0.78	-0.3
1,998,157	-		ABZR87_RS09410	0.78	-0.6
1,998,157	-		ABZR87_RS09410	0.78	+0.8
1,998,161	+		ABZR87_RS09410	0.78	-0.5
1,998,161	+		ABZR87_RS09410	0.78	-2.0
1,998,161	+		ABZR87_RS09410	0.78	-1.5
1,998,162	-		ABZR87_RS09410	0.78	-0.1
1,998,162	-		ABZR87_RS09410	0.78	+0.0
1,998,162	-		ABZR87_RS09410	0.78	+1.5
1,998,166	-		ABZR87_RS09410	0.79	+1.1
1,998,166	-		ABZR87_RS09410	0.79	+0.8
1,998,166	-		ABZR87_RS09410	0.79	-0.7
1,998,532	+		ABZR87_RS09410	0.88	+0.4
1,998,532	+		ABZR87_RS09410	0.88	+0.4
1,998,553	+		ABZR87_RS09410	0.89	-0.3
1,998,693	+				+0.0
1,998,694	-				+0.5
1,998,862	+				+0.8
1,998,862	+				-1.2
1,998,863	-				-1.6
1,998,863	-				-0.1
1,998,896	-				-0.5
1,998,896	-				-0.8
1,998,934	+				-0.6
1,998,934	+				-0.9
1,999,006	+				+0.6
1,999,007	-				+0.4
1,999,195	+		ABZR87_RS09415	0.14	+0.0
1,999,201	+		ABZR87_RS09415	0.15	+1.4
1,999,201	+		ABZR87_RS09415	0.15	+1.7
1,999,201	+		ABZR87_RS09415	0.15	-0.5
1,999,217	+		ABZR87_RS09415	0.18	-0.0
1,999,217	+		ABZR87_RS09415	0.18	+1.1
1,999,218	-		ABZR87_RS09415	0.18	-0.8
1,999,218	-		ABZR87_RS09415	0.18	-0.9
1,999,218	-		ABZR87_RS09415	0.18	+0.7
1,999,270	+		ABZR87_RS09415	0.25	-0.3
1,999,270	+		ABZR87_RS09415	0.25	-1.2
1,999,531	+		ABZR87_RS09415	0.63	-2.3
1,999,532	-		ABZR87_RS09415	0.63	-1.0
1,999,532	-		ABZR87_RS09415	0.63	-2.1
1,999,532	-		ABZR87_RS09415	0.63	-0.5
1,999,648	+		ABZR87_RS09415	0.80	+0.0
1,999,648	+		ABZR87_RS09415	0.80	-1.5
1,999,649	-		ABZR87_RS09415	0.80	-1.1
1,999,649	-		ABZR87_RS09415	0.80	-1.4
1,999,649	-		ABZR87_RS09415	0.80	+2.3