Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS07175

Experiment: butyrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	butyrate (C)
1,516,159	+				-1.2
1,516,159	+				+0.6
1,516,232	+				+1.0
1,516,232	+				+0.8
1,516,233	-				-1.7
1,516,233	-				-0.9
1,516,258	+				-0.9
1,516,258	+				-0.0
1,516,259	-				-1.0
1,516,259	-				+0.1
1,516,259	-				+0.5
1,516,259	-				+0.4
1,516,328	+				+0.9
1,516,328	+				+0.2
1,516,328	+				+0.8
1,516,328	+				-0.2
1,516,328	+				-0.2
1,516,328	+				+0.8
1,516,328	+				+0.5
1,516,328	+				+0.1
1,516,328	+				+0.5
1,516,328	+				-1.2
1,516,328	+				-0.2
1,516,329	-				-0.4
1,516,329	-				+0.4
1,516,329	-				+0.2
1,516,329	-				+0.0
1,516,329	-				+0.1
1,516,329	-				+0.6
1,516,329	-				-1.4
1,516,332	+				+1.4
1,516,332	+				+1.3
1,516,332	+				+0.3
1,516,332	+				-0.5
1,516,332	+				+0.7
1,516,332	+				+0.3
1,516,333	-				-0.5
1,516,333	-				+1.9
1,516,333	-				+0.9
1,516,333	-				+0.5
1,516,333	-				-2.0
1,516,339	+				+1.1
1,516,339	+				-0.9
1,516,339	+				+0.1
1,516,339	+				+0.7
1,516,340	-				+0.3
1,516,340	-				+1.2
1,516,340	-				+0.1
1,516,340	-				-0.5
1,516,340	-				+1.1
1,516,345	+				+0.2
1,516,345	+				+0.5
1,516,346	-				+0.8
1,516,346	-				+0.5
1,516,346	-				-1.0
1,516,374	+				-3.2
1,516,374	+				+1.1
1,516,374	+				+0.6
1,516,374	+				-0.2
1,516,375	-				+1.4
1,516,375	-				-2.6
1,516,375	-				+0.5
1,516,375	-				+0.0
1,516,375	-				+0.1
1,516,503	-		ABZR87_RS07170	0.20	+0.6
1,516,594	+		ABZR87_RS07170	0.31	+0.8
1,516,594	+		ABZR87_RS07170	0.31	-1.1
1,516,595	-		ABZR87_RS07170	0.32	+0.5
1,516,595	-		ABZR87_RS07170	0.32	+0.8
1,516,849	+		ABZR87_RS07170	0.62	-0.4
1,516,849	+		ABZR87_RS07170	0.62	+1.9
1,516,849	+		ABZR87_RS07170	0.62	+0.1
1,516,850	-		ABZR87_RS07170	0.62	+1.0
1,516,916	+		ABZR87_RS07170	0.70	+0.1
1,516,916	+		ABZR87_RS07170	0.70	-1.3
1,516,916	+		ABZR87_RS07170	0.70	+0.4
1,516,917	-		ABZR87_RS07170	0.70	+0.7
1,516,917	-		ABZR87_RS07170	0.70	+0.4
1,516,917	-		ABZR87_RS07170	0.70	-0.1
1,516,917	-		ABZR87_RS07170	0.70	-1.0
1,516,917	-		ABZR87_RS07170	0.70	+0.6
1,516,917	-		ABZR87_RS07170	0.70	+0.2
1,516,917	-		ABZR87_RS07170	0.70	+0.4
1,516,917	-		ABZR87_RS07170	0.70	+0.7
1,517,004	+		ABZR87_RS07170	0.81	+0.6
1,517,004	+		ABZR87_RS07170	0.81	+0.2
1,517,071	+		ABZR87_RS07170	0.89	-0.7
1,517,072	-		ABZR87_RS07170	0.89	+0.0
1,517,072	-		ABZR87_RS07170	0.89	+0.6
1,517,075	-		ABZR87_RS07170	0.89	-0.1
1,517,157	+				-2.8
1,517,157	+				-0.1
1,517,157	+				-1.0
1,517,157	+				-0.2
1,517,157	+				+1.1
1,517,157	+				-0.6
1,517,158	-				-0.5
1,517,172	-				-1.6
1,517,221	+				+0.9
1,517,221	+				+0.9
1,517,221	+				-0.9
1,517,221	+				-0.4
1,517,221	+				+0.1
1,517,221	+				-1.2
1,517,221	+				+0.3
1,517,221	+				-1.3
1,517,221	+				+0.7
1,517,222	-				+0.6
1,517,222	-				-0.6
1,517,222	-				-0.2
1,517,222	-				-1.5
1,517,222	-				+0.0
1,517,222	-				-0.4
1,517,222	-				-1.2
1,517,222	-				+0.9
1,517,222	-				-3.2
1,517,222	-				+1.0
1,517,222	-				+0.1
1,517,233	+				+1.0
1,517,233	+				-2.5
1,517,233	+				-1.3
1,517,233	+				+0.9
1,517,234	-				+1.3
1,517,234	-				-0.5
1,517,234	-				-1.1
1,517,234	-				+0.4
1,517,234	-				-0.3
1,517,234	-				-0.3
1,517,234	-				+0.9
1,517,249	+				+0.8
1,517,259	+				-0.1
1,517,259	+				+0.4
1,517,259	+				-1.3
1,517,260	-				+0.8
1,517,260	-				+0.1
1,517,267	+				-1.8
1,517,268	-				+0.3
1,517,316	+		ABZR87_RS07175	0.12	+0.5
1,517,316	+		ABZR87_RS07175	0.12	-0.5
1,517,317	-		ABZR87_RS07175	0.12	+0.1
1,517,317	-		ABZR87_RS07175	0.12	-0.6
1,517,317	-		ABZR87_RS07175	0.12	-0.3
1,517,318	+		ABZR87_RS07175	0.12	-0.7
1,517,319	-		ABZR87_RS07175	0.13	+0.8
1,517,319	-		ABZR87_RS07175	0.13	-0.2
1,517,336	+		ABZR87_RS07175	0.14	+1.2
1,517,337	-		ABZR87_RS07175	0.14	-1.8
1,517,337	-		ABZR87_RS07175	0.14	+0.8
1,517,375	+		ABZR87_RS07175	0.17	+0.0
1,517,376	-		ABZR87_RS07175	0.17	-0.4
1,517,413	-		ABZR87_RS07175	0.20	+0.7
1,517,413	-		ABZR87_RS07175	0.20	-1.0
1,517,426	+		ABZR87_RS07175	0.21	+0.7
1,517,427	-		ABZR87_RS07175	0.21	+0.9
1,517,427	-		ABZR87_RS07175	0.21	-2.8
1,517,427	-		ABZR87_RS07175	0.21	+0.8
1,517,427	-		ABZR87_RS07175	0.21	+1.6
1,517,434	+		ABZR87_RS07175	0.21	-3.3
1,517,434	+		ABZR87_RS07175	0.21	+0.6
1,517,434	+		ABZR87_RS07175	0.21	+0.3
1,517,434	+		ABZR87_RS07175	0.21	+0.1
1,517,434	+		ABZR87_RS07175	0.21	-0.2
1,517,434	+		ABZR87_RS07175	0.21	-1.4
1,517,434	+		ABZR87_RS07175	0.21	-0.4
1,517,434	+		ABZR87_RS07175	0.21	+2.1
1,517,434	+		ABZR87_RS07175	0.21	-0.9
1,517,434	+		ABZR87_RS07175	0.21	-1.9
1,517,435	-		ABZR87_RS07175	0.22	+1.2
1,517,435	-		ABZR87_RS07175	0.22	+1.2
1,517,435	-		ABZR87_RS07175	0.22	+0.7
1,517,435	-		ABZR87_RS07175	0.22	-0.8
1,517,435	-		ABZR87_RS07175	0.22	-1.2
1,517,435	-		ABZR87_RS07175	0.22	+0.1
1,517,435	-		ABZR87_RS07175	0.22	+1.0
1,517,435	-		ABZR87_RS07175	0.22	+0.2
1,517,435	-		ABZR87_RS07175	0.22	-2.6
1,517,435	-		ABZR87_RS07175	0.22	-0.8
1,517,435	-		ABZR87_RS07175	0.22	+0.4
1,517,435	-		ABZR87_RS07175	0.22	-1.0
1,517,435	-		ABZR87_RS07175	0.22	-0.8
1,517,435	-		ABZR87_RS07175	0.22	-0.1
1,517,435	-		ABZR87_RS07175	0.22	+0.2
1,517,483	+		ABZR87_RS07175	0.25	-0.4
1,517,483	+		ABZR87_RS07175	0.25	+0.8
1,517,483	+		ABZR87_RS07175	0.25	+1.4
1,517,484	-		ABZR87_RS07175	0.25	-0.3
1,517,484	-		ABZR87_RS07175	0.25	+1.2
1,517,562	-		ABZR87_RS07175	0.31	+1.7
1,517,582	+		ABZR87_RS07175	0.33	+0.4
1,517,583	-		ABZR87_RS07175	0.33	+1.0
1,517,583	-		ABZR87_RS07175	0.33	-0.1
1,517,583	-		ABZR87_RS07175	0.33	+0.1
1,517,701	+		ABZR87_RS07175	0.42	+0.7
1,517,701	+		ABZR87_RS07175	0.42	-1.3
1,517,702	-		ABZR87_RS07175	0.42	+0.5
1,517,752	+		ABZR87_RS07175	0.46	+0.3
1,517,753	+		ABZR87_RS07175	0.46	-0.2
1,517,753	+		ABZR87_RS07175	0.46	+0.0
1,517,753	+		ABZR87_RS07175	0.46	+1.4
1,517,753	+		ABZR87_RS07175	0.46	-0.7
1,517,753	+		ABZR87_RS07175	0.46	-0.9
1,517,753	+		ABZR87_RS07175	0.46	+1.1
1,517,753	+		ABZR87_RS07175	0.46	+0.5
1,517,753	+		ABZR87_RS07175	0.46	+0.8
1,517,753	+		ABZR87_RS07175	0.46	+0.4
1,517,753	+		ABZR87_RS07175	0.46	-0.5
1,517,753	+		ABZR87_RS07175	0.46	+0.3
1,517,753	+		ABZR87_RS07175	0.46	-1.8
1,517,753	+		ABZR87_RS07175	0.46	-0.1
1,517,754	-		ABZR87_RS07175	0.46	+0.8
1,517,754	-		ABZR87_RS07175	0.46	-0.4
1,517,754	-		ABZR87_RS07175	0.46	+0.7
1,517,754	-		ABZR87_RS07175	0.46	-0.5
1,517,754	-		ABZR87_RS07175	0.46	+0.1
1,517,754	-		ABZR87_RS07175	0.46	+1.1
1,517,754	-		ABZR87_RS07175	0.46	+0.7
1,517,933	+		ABZR87_RS07175	0.60	+2.8
1,517,934	-		ABZR87_RS07175	0.60	+0.9
1,517,937	+		ABZR87_RS07175	0.61	+1.1
1,517,937	+		ABZR87_RS07175	0.61	+0.6
1,517,937	+		ABZR87_RS07175	0.61	+0.5
1,517,937	+		ABZR87_RS07175	0.61	+0.1
1,517,937	+		ABZR87_RS07175	0.61	+0.3
1,517,937	+		ABZR87_RS07175	0.61	-3.2
1,517,938	-		ABZR87_RS07175	0.61	+0.1
1,517,938	-		ABZR87_RS07175	0.61	+0.0
1,517,938	-		ABZR87_RS07175	0.61	+0.9
1,518,031	+		ABZR87_RS07175	0.68	+0.4
1,518,032	-		ABZR87_RS07175	0.68	+1.1
1,518,032	-		ABZR87_RS07175	0.68	+0.3
1,518,032	-		ABZR87_RS07175	0.68	+1.7
1,518,042	+		ABZR87_RS07175	0.69	-0.9
1,518,210	+		ABZR87_RS07175	0.82	+0.9
1,518,211	-		ABZR87_RS07175	0.82	+0.4
1,518,223	+		ABZR87_RS07175	0.83	+1.0
1,518,223	+		ABZR87_RS07175	0.83	-1.8
1,518,223	+		ABZR87_RS07175	0.83	+0.2
1,518,224	-		ABZR87_RS07175	0.83	+0.2
1,518,224	-		ABZR87_RS07175	0.83	-1.4
1,518,224	-		ABZR87_RS07175	0.83	+0.2
1,518,224	-		ABZR87_RS07175	0.83	-0.5
1,518,224	-		ABZR87_RS07175	0.83	-2.3
1,518,224	-		ABZR87_RS07175	0.83	-0.2
1,518,363	+				+0.7
1,518,364	-				-0.1
1,518,419	+				-0.1
1,518,419	+				+0.2
1,518,420	-				+1.4
1,518,420	-				-0.9
1,518,420	-				-0.4
1,518,420	-				+0.4
1,518,420	-				+0.4
1,518,420	-				+0.6
1,518,484	+				-1.7
1,518,484	+				+1.8
1,518,484	+				+0.3
1,518,485	-				+0.6
1,518,485	-				-0.0
1,518,571	+		ABZR87_RS07180	0.18	-0.2
1,518,572	-		ABZR87_RS07180	0.18	+0.2
1,518,638	+		ABZR87_RS07180	0.27	+0.1
1,518,638	+		ABZR87_RS07180	0.27	-0.2
1,518,638	+		ABZR87_RS07180	0.27	+2.4
1,518,638	+		ABZR87_RS07180	0.27	-1.2
1,518,638	+		ABZR87_RS07180	0.27	-0.8
1,518,639	-		ABZR87_RS07180	0.27	+0.2
1,518,683	+		ABZR87_RS07180	0.33	-0.5
1,518,736	+		ABZR87_RS07180	0.40	+1.7
1,518,737	-		ABZR87_RS07180	0.40	-0.8
1,518,737	-		ABZR87_RS07180	0.40	+0.6
1,518,737	-		ABZR87_RS07180	0.40	-0.9
1,518,801	-		ABZR87_RS07180	0.49	-1.3
1,518,831	-		ABZR87_RS07180	0.53	-0.3
1,518,859	+		ABZR87_RS07180	0.57	-0.1
1,518,859	+		ABZR87_RS07180	0.57	-1.1
1,518,859	+		ABZR87_RS07180	0.57	+0.7
1,518,859	+		ABZR87_RS07180	0.57	-2.9
1,518,859	+		ABZR87_RS07180	0.57	+0.8
1,518,859	+		ABZR87_RS07180	0.57	+0.3
1,518,859	+		ABZR87_RS07180	0.57	+3.1
1,518,859	+		ABZR87_RS07180	0.57	+0.5
1,518,859	+		ABZR87_RS07180	0.57	-2.2
1,518,859	+		ABZR87_RS07180	0.57	+1.3
1,518,859	+		ABZR87_RS07180	0.57	-1.7
1,518,860	-		ABZR87_RS07180	0.57	-1.3
1,518,860	-		ABZR87_RS07180	0.57	+0.7
1,518,860	-		ABZR87_RS07180	0.57	-0.5
1,518,860	-		ABZR87_RS07180	0.57	-0.5
1,518,860	-		ABZR87_RS07180	0.57	-0.4
1,518,979	+		ABZR87_RS07180	0.73	+0.0
1,518,980	-		ABZR87_RS07180	0.73	+0.2
1,518,980	-		ABZR87_RS07180	0.73	-0.6
1,519,148	+				-2.4
1,519,156	+				-0.0
1,519,156	+				+0.7
1,519,156	+				+0.7
1,519,156	+				+0.8
1,519,156	+				-0.2
1,519,156	+				-0.2
1,519,156	+				-3.2
1,519,157	-				+0.1
1,519,157	-				+0.1
1,519,157	-				-1.5
1,519,157	-				+0.7
1,519,226	+				+0.0
1,519,226	+				+1.9
1,519,226	+				-1.1
1,519,227	-				+1.1
1,519,227	-				-1.6
1,519,227	-				-0.5
1,519,227	-				-0.9
1,519,227	-				+0.7
1,519,259	+				+0.8
1,519,259	+				-1.4
1,519,259	+				+0.6
1,519,259	+				-0.0
1,519,260	-				-2.4
1,519,266	+				-1.1
1,519,266	+				+0.4
1,519,266	+				-0.4
1,519,266	+				-0.7
1,519,266	+				+0.9
1,519,266	+				+0.6
1,519,267	-				+0.4
1,519,267	-				-0.6
1,519,267	-				-0.9
1,519,267	-				-1.3
1,519,267	-				+0.3
1,519,267	-				-0.5
1,519,398	+				-1.3
1,519,399	-				+0.3
1,519,399	-				-0.2
1,519,399	-				-0.1
1,519,434	+		ABZR87_RS07185	0.12	-0.2
1,519,434	+		ABZR87_RS07185	0.12	-2.7