Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS07035

Experiment: butyrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	butyrate (C)
1,485,607	+		ABZR87_RS07025	0.88	-0.2
1,485,608	-		ABZR87_RS07025	0.88	-0.5
1,485,623	+		ABZR87_RS07025	0.89	+0.6
1,485,623	+		ABZR87_RS07025	0.89	+1.0
1,485,624	-		ABZR87_RS07025	0.90	-1.4
1,485,624	-		ABZR87_RS07025	0.90	+0.8
1,485,624	-		ABZR87_RS07025	0.90	-3.2
1,485,624	-		ABZR87_RS07025	0.90	-0.0
1,485,658	+				-1.2
1,485,724	+				+0.3
1,485,725	-				-0.6
1,485,725	-				+1.7
1,485,725	-				-2.2
1,485,741	+				+0.9
1,485,742	-				+0.3
1,485,742	-				-2.1
1,485,742	-				-0.2
1,485,742	-				-0.2
1,485,742	-				+0.8
1,485,799	+				+0.2
1,485,799	+				+1.1
1,485,800	-				+0.5
1,485,925	+		ABZR87_RS07030	0.23	+0.4
1,486,115	+		ABZR87_RS07030	0.52	+0.3
1,486,116	-		ABZR87_RS07030	0.52	+1.2
1,486,154	+		ABZR87_RS07030	0.58	+0.8
1,486,154	+		ABZR87_RS07030	0.58	-0.7
1,486,297	+		ABZR87_RS07030	0.80	-3.4
1,486,297	+		ABZR87_RS07030	0.80	+0.3
1,486,297	+		ABZR87_RS07030	0.80	-0.7
1,486,297	+		ABZR87_RS07030	0.80	+1.2
1,486,297	+		ABZR87_RS07030	0.80	+1.5
1,486,298	-		ABZR87_RS07030	0.80	+1.3
1,486,298	-		ABZR87_RS07030	0.80	+0.5
1,486,298	-		ABZR87_RS07030	0.80	-0.6
1,486,344	+		ABZR87_RS07030	0.87	-0.0
1,486,345	-		ABZR87_RS07030	0.87	-0.7
1,486,345	-		ABZR87_RS07030	0.87	+1.1
1,486,345	-		ABZR87_RS07030	0.87	+0.9
1,486,345	-		ABZR87_RS07030	0.87	+0.3
1,486,345	-		ABZR87_RS07030	0.87	-0.5
1,486,519	+				-0.4
1,486,519	+				+0.7
1,486,519	+				+0.0
1,486,520	-				+1.3
1,486,543	-				-0.8
1,486,574	+				+1.1
1,486,574	+				-1.2
1,486,574	+				-2.4
1,486,574	+				-0.9
1,486,574	+				-1.5
1,486,575	-				-1.4
1,486,575	-				-0.1
1,486,591	+				-2.8
1,486,591	+				-1.4
1,486,591	+				-0.9
1,486,591	+				-1.7
1,486,615	+				-1.2
1,486,615	+				-2.7
1,486,640	+		ABZR87_RS07035	0.12	-1.1
1,486,640	+		ABZR87_RS07035	0.12	-1.9
1,486,640	+		ABZR87_RS07035	0.12	-1.2
1,486,641	-		ABZR87_RS07035	0.12	-1.5
1,486,664	-		ABZR87_RS07035	0.15	+1.1
1,486,708	+		ABZR87_RS07035	0.20	-2.9
1,486,708	+		ABZR87_RS07035	0.20	-0.5
1,486,709	-		ABZR87_RS07035	0.20	-0.9
1,486,709	-		ABZR87_RS07035	0.20	-0.9
1,486,709	-		ABZR87_RS07035	0.20	-1.2
1,486,709	-		ABZR87_RS07035	0.20	-1.2
1,486,810	+		ABZR87_RS07035	0.31	+1.7
1,486,810	+		ABZR87_RS07035	0.31	-1.5
1,486,810	+		ABZR87_RS07035	0.31	-1.9
1,486,811	-		ABZR87_RS07035	0.31	-3.1
1,486,811	-		ABZR87_RS07035	0.31	-1.9
1,486,811	-		ABZR87_RS07035	0.31	-2.8
1,486,811	-		ABZR87_RS07035	0.31	-0.9
1,486,813	+		ABZR87_RS07035	0.31	-2.5
1,486,813	+		ABZR87_RS07035	0.31	-2.4
1,486,814	-		ABZR87_RS07035	0.31	-3.2
1,486,814	-		ABZR87_RS07035	0.31	-1.9
1,486,939	+		ABZR87_RS07035	0.45	-1.9
1,486,939	+		ABZR87_RS07035	0.45	-3.0
1,486,939	+		ABZR87_RS07035	0.45	-0.5
1,486,939	+		ABZR87_RS07035	0.45	+0.1
1,486,940	-		ABZR87_RS07035	0.46	-2.2
1,486,940	-		ABZR87_RS07035	0.46	-3.1
1,486,940	-		ABZR87_RS07035	0.46	-2.7
1,486,940	-		ABZR87_RS07035	0.46	+0.9
1,486,940	-		ABZR87_RS07035	0.46	-3.1
1,486,940	-		ABZR87_RS07035	0.46	+0.1
1,486,940	-		ABZR87_RS07035	0.46	+0.1
1,486,940	-		ABZR87_RS07035	0.46	-1.2
1,487,073	+		ABZR87_RS07035	0.60	-2.2
1,487,073	+		ABZR87_RS07035	0.60	-0.5
1,487,073	+		ABZR87_RS07035	0.60	-0.5
1,487,073	+		ABZR87_RS07035	0.60	-1.5
1,487,074	-		ABZR87_RS07035	0.61	+0.1
1,487,074	-		ABZR87_RS07035	0.61	+1.1
1,487,074	-		ABZR87_RS07035	0.61	-1.2
1,487,074	-		ABZR87_RS07035	0.61	-0.5
1,487,141	-		ABZR87_RS07035	0.68	-1.7
1,487,141	-		ABZR87_RS07035	0.68	-2.5
1,487,279	+		ABZR87_RS07035	0.83	-1.7
1,487,279	+		ABZR87_RS07035	0.83	-2.2
1,487,279	+		ABZR87_RS07035	0.83	-1.2
1,487,279	+		ABZR87_RS07035	0.83	-2.2
1,487,279	+		ABZR87_RS07035	0.83	-1.2
1,487,279	+		ABZR87_RS07035	0.83	+0.1
1,487,279	+		ABZR87_RS07035	0.83	+1.1
1,487,279	+		ABZR87_RS07035	0.83	-2.6
1,487,279	+		ABZR87_RS07035	0.83	+2.1
1,487,279	+		ABZR87_RS07035	0.83	+0.1
1,487,279	+		ABZR87_RS07035	0.83	-1.2
1,487,279	+		ABZR87_RS07035	0.83	-2.5
1,487,279	+		ABZR87_RS07035	0.83	-0.5
1,487,279	+		ABZR87_RS07035	0.83	-0.9
1,487,279	+		ABZR87_RS07035	0.83	-2.2
1,487,279	+		ABZR87_RS07035	0.83	-0.9
1,487,279	+		ABZR87_RS07035	0.83	-0.5
1,487,279	+		ABZR87_RS07035	0.83	-2.1
1,487,280	-		ABZR87_RS07035	0.84	+0.6
1,487,280	-		ABZR87_RS07035	0.84	-2.4
1,487,280	-		ABZR87_RS07035	0.84	-0.9
1,487,280	-		ABZR87_RS07035	0.84	-3.8
1,487,280	-		ABZR87_RS07035	0.84	-2.2
1,487,280	-		ABZR87_RS07035	0.84	-1.5
1,487,281	+		ABZR87_RS07035	0.84	-0.9
1,487,281	+		ABZR87_RS07035	0.84	-1.7
1,487,282	-		ABZR87_RS07035	0.84	+0.1
1,487,282	-		ABZR87_RS07035	0.84	-1.7
1,487,282	-		ABZR87_RS07035	0.84	-0.8
1,487,299	+		ABZR87_RS07035	0.86	+2.8
1,487,300	-		ABZR87_RS07035	0.86	-3.7
1,487,347	+				+1.1
1,487,347	+				-1.5
1,487,347	+				-1.2
1,487,347	+				-2.9
1,487,348	-				-2.1
1,487,350	+				-1.5
1,487,350	+				-2.4
1,487,351	-				-1.2
1,487,351	-				-1.9
1,487,351	-				-1.5
1,487,351	-				-1.9
1,487,402	+				-2.1
1,487,402	+				-3.6
1,487,403	-				-2.4
1,487,403	-				-2.1
1,487,403	-				-0.2
1,487,437	+				+0.4
1,487,437	+				-0.1
1,487,437	+				+0.9
1,487,437	+				+1.4
1,487,437	+				+2.1
1,487,437	+				-0.5
1,487,438	-				-0.3
1,487,438	-				+0.5
1,487,438	-				+0.2
1,487,558	+		ABZR87_RS07040	0.11	-4.1
1,487,558	+		ABZR87_RS07040	0.11	-0.2
1,487,558	+		ABZR87_RS07040	0.11	+0.1
1,487,558	+		ABZR87_RS07040	0.11	+0.1
1,487,558	+		ABZR87_RS07040	0.11	-0.4
1,487,559	-		ABZR87_RS07040	0.11	-1.1
1,487,559	-		ABZR87_RS07040	0.11	-2.5
1,487,868	+				+1.0
1,487,868	+				+0.1
1,487,869	-				+0.7
1,487,869	-				-4.1
1,487,880	+				+0.8
1,487,880	+				+0.4
1,487,881	-				+0.3
1,488,007	+				+1.4
1,488,008	-				-3.7
1,488,027	-				-0.3
1,488,051	-				+0.1
1,488,051	-				-1.0