Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS05110

Experiment: butyrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	butyrate (C)
1,075,991	+		ABZR87_RS05105	0.52	+0.9
1,075,992	-		ABZR87_RS05105	0.52	-1.9
1,075,992	-		ABZR87_RS05105	0.52	-2.4
1,075,992	-		ABZR87_RS05105	0.52	+1.4
1,075,992	-		ABZR87_RS05105	0.52	-1.0
1,075,992	-		ABZR87_RS05105	0.52	-0.9
1,076,196	+		ABZR87_RS05105	0.68	+0.3
1,076,196	+		ABZR87_RS05105	0.68	-3.2
1,076,532	+				+0.3
1,076,533	-				-2.2
1,076,851	-				+0.1
1,076,851	-				+0.8
1,076,851	-				-2.4
1,076,851	-				-2.9
1,076,851	-				+0.6
1,076,875	-		ABZR87_RS05110	0.10	+1.1
1,076,907	+		ABZR87_RS05110	0.12	-2.2
1,076,907	+		ABZR87_RS05110	0.12	+0.0
1,076,907	+		ABZR87_RS05110	0.12	+0.9
1,076,907	+		ABZR87_RS05110	0.12	+0.4
1,076,907	+		ABZR87_RS05110	0.12	+1.3
1,076,907	+		ABZR87_RS05110	0.12	+0.1
1,076,908	-		ABZR87_RS05110	0.12	+0.1
1,076,908	-		ABZR87_RS05110	0.12	-0.5
1,076,908	-		ABZR87_RS05110	0.12	+0.1
1,076,908	-		ABZR87_RS05110	0.12	-0.3
1,076,908	-		ABZR87_RS05110	0.12	-0.2
1,076,908	-		ABZR87_RS05110	0.12	+0.3
1,076,908	-		ABZR87_RS05110	0.12	+0.0
1,076,908	-		ABZR87_RS05110	0.12	+0.6
1,076,908	-		ABZR87_RS05110	0.12	-2.3
1,076,908	-		ABZR87_RS05110	0.12	-0.6
1,076,908	-		ABZR87_RS05110	0.12	-2.0
1,076,908	-		ABZR87_RS05110	0.12	+0.2
1,076,908	-		ABZR87_RS05110	0.12	-1.3
1,077,065	-		ABZR87_RS05110	0.22	-0.2
1,077,118	+		ABZR87_RS05110	0.25	-1.0
1,077,118	+		ABZR87_RS05110	0.25	+0.4
1,077,118	+		ABZR87_RS05110	0.25	+1.3
1,077,118	+		ABZR87_RS05110	0.25	+0.5
1,077,118	+		ABZR87_RS05110	0.25	+0.1
1,077,119	-		ABZR87_RS05110	0.25	+0.5
1,077,119	-		ABZR87_RS05110	0.25	-1.0
1,077,119	-		ABZR87_RS05110	0.25	-0.6
1,077,119	-		ABZR87_RS05110	0.25	+0.5
1,077,119	-		ABZR87_RS05110	0.25	+1.4
1,077,120	+		ABZR87_RS05110	0.25	-2.6
1,077,120	+		ABZR87_RS05110	0.25	+0.4
1,077,121	-		ABZR87_RS05110	0.25	+0.8
1,077,121	-		ABZR87_RS05110	0.25	-0.3
1,077,220	+		ABZR87_RS05110	0.32	-0.4
1,077,220	+		ABZR87_RS05110	0.32	+1.0
1,077,220	+		ABZR87_RS05110	0.32	-0.8
1,077,220	+		ABZR87_RS05110	0.32	+1.6
1,077,220	+		ABZR87_RS05110	0.32	+0.7
1,077,221	-		ABZR87_RS05110	0.32	-0.9
1,077,221	-		ABZR87_RS05110	0.32	-1.2
1,077,221	-		ABZR87_RS05110	0.32	+0.6
1,077,221	-		ABZR87_RS05110	0.32	+0.2
1,077,221	-		ABZR87_RS05110	0.32	-2.0
1,077,221	-		ABZR87_RS05110	0.32	-0.3
1,077,221	-		ABZR87_RS05110	0.32	+0.0
1,077,221	-		ABZR87_RS05110	0.32	+0.6
1,077,270	+		ABZR87_RS05110	0.35	-1.8
1,077,270	+		ABZR87_RS05110	0.35	-0.7
1,077,271	-		ABZR87_RS05110	0.35	+0.3
1,077,271	-		ABZR87_RS05110	0.35	-0.9
1,077,300	+		ABZR87_RS05110	0.37	-0.8
1,077,302	-		ABZR87_RS05110	0.37	-0.1
1,077,544	+		ABZR87_RS05110	0.52	+0.2
1,077,544	+		ABZR87_RS05110	0.52	-3.0
1,077,544	+		ABZR87_RS05110	0.52	+0.0
1,077,544	+		ABZR87_RS05110	0.52	-0.5
1,077,544	+		ABZR87_RS05110	0.52	-0.2
1,077,544	+		ABZR87_RS05110	0.52	+2.0
1,077,544	+		ABZR87_RS05110	0.52	-2.6
1,077,544	+		ABZR87_RS05110	0.52	-0.1
1,077,544	+		ABZR87_RS05110	0.52	-1.1
1,077,544	+		ABZR87_RS05110	0.52	-1.9
1,077,544	+		ABZR87_RS05110	0.52	+1.0
1,077,544	+		ABZR87_RS05110	0.52	+0.5
1,077,545	-		ABZR87_RS05110	0.52	+0.6
1,077,545	-		ABZR87_RS05110	0.52	-2.3
1,077,545	-		ABZR87_RS05110	0.52	+1.2
1,077,545	-		ABZR87_RS05110	0.52	+1.0
1,077,545	-		ABZR87_RS05110	0.52	+0.5
1,077,552	+		ABZR87_RS05110	0.52	+0.5
1,077,552	+		ABZR87_RS05110	0.52	-1.3
1,077,552	+		ABZR87_RS05110	0.52	-1.6
1,077,553	-		ABZR87_RS05110	0.52	-3.9
1,077,553	-		ABZR87_RS05110	0.52	+0.8
1,077,815	-		ABZR87_RS05110	0.69	-2.2
1,078,054	+		ABZR87_RS05110	0.84	+1.0
1,078,054	+		ABZR87_RS05110	0.84	+0.4
1,078,054	+		ABZR87_RS05110	0.84	-0.0
1,078,055	-		ABZR87_RS05110	0.84	-1.0
1,078,055	-		ABZR87_RS05110	0.84	-1.0
1,078,097	-		ABZR87_RS05110	0.86	+0.5
1,078,222	+				-0.3
1,078,222	+				-0.6
1,078,222	+				-0.1
1,078,223	-				+0.6
1,078,223	-				-0.1
1,078,233	-				+0.2
1,078,238	+				+0.2
1,078,238	+				+0.7
1,078,238	+				+0.7
1,078,238	+				-1.6
1,078,239	-				-0.6
1,078,239	-				+0.4
1,078,239	-				+0.2
1,078,239	-				+0.4
1,078,239	-				+2.0
1,078,239	-				+3.3
1,078,258	+				-0.3
1,078,258	+				+0.2
1,078,258	+				-2.8
1,078,258	+				+0.0
1,078,258	+				+0.0
1,078,259	-				+1.1
1,078,259	-				+0.2
1,078,291	+				+0.9
1,078,291	+				+0.7
1,078,291	+				-0.6
1,078,291	+				-0.2
1,078,292	-				+0.1
1,078,292	-				-3.6
1,078,292	-				-0.5
1,078,292	-				-1.0
1,078,292	-				-0.5
1,078,292	-				-0.6
1,078,292	-				-0.6
1,078,292	-				-0.1
1,078,410	+				-2.1
1,078,410	+				+0.1
1,078,410	+				-2.5
1,078,410	+				-0.1
1,078,410	+				-0.1
1,078,410	+				-1.1
1,078,410	+				-2.4
1,078,410	+				-1.6
1,078,410	+				+0.7
1,078,411	-				-1.2
1,078,411	-				-1.0
1,078,411	-				-0.7
1,078,411	-				-0.1
1,078,411	-				-2.9
1,078,411	-				-0.6
1,078,411	-				+1.2
1,078,411	-				+1.2
1,078,481	+				-1.5
1,078,481	+				-1.0
1,078,481	+				+1.3
1,078,482	-				-1.0
1,078,482	-				+0.1
1,078,482	-				-1.1
1,078,482	-				+1.4
1,078,482	-				+2.3
1,078,601	+		ABZR87_RS05115	0.24	+0.3
1,078,601	+		ABZR87_RS05115	0.24	-0.9
1,078,602	-		ABZR87_RS05115	0.24	+0.6
1,078,602	-		ABZR87_RS05115	0.24	+0.0
1,078,602	-		ABZR87_RS05115	0.24	-1.2
1,078,602	-		ABZR87_RS05115	0.24	+0.5
1,078,739	-		ABZR87_RS05115	0.50	-0.6
1,078,871	+		ABZR87_RS05115	0.74	-0.6
1,078,871	+		ABZR87_RS05115	0.74	-0.4
1,078,871	+		ABZR87_RS05115	0.74	+2.4
1,078,872	-		ABZR87_RS05115	0.74	+0.3
1,078,872	-		ABZR87_RS05115	0.74	+0.3
1,078,872	-		ABZR87_RS05115	0.74	+0.1
1,078,872	-		ABZR87_RS05115	0.74	+0.5
1,078,872	-		ABZR87_RS05115	0.74	-0.4
1,078,872	-		ABZR87_RS05115	0.74	-2.6
1,078,872	-		ABZR87_RS05115	0.74	-1.0
1,078,970	+				+0.0
1,078,970	+				+0.6
1,078,970	+				+0.1
1,078,970	+				+0.8
1,078,970	+				-0.6
1,078,970	+				+0.5
1,078,971	-				+0.7
1,078,971	-				-2.7
1,078,971	-				-3.5
1,078,972	+				-0.5
1,078,972	+				+0.2
1,078,972	+				-0.2
1,078,972	+				-3.4
1,078,972	+				+0.8
1,078,972	+				+0.6
1,078,973	-				-1.3