Experiment: butyrate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS01910 and ABZR87_RS01915 are separated by 391 nucleotides ABZR87_RS01915 and ABZR87_RS01920 are separated by 140 nucleotides
ABZR87_RS01910: ABZR87_RS01910 - peroxiredoxin, at 405,180 to 405,680
_RS01910
ABZR87_RS01915: ABZR87_RS01915 - cell division protein FtsZ, at 406,072 to 407,271
_RS01915
ABZR87_RS01920: ABZR87_RS01920 - cell division protein FtsA, at 407,412 to 408,644
_RS01920
Position (kb) 406
407
408 Strain fitness (log2 ratio) -1
0
1 at 405.084 kb on + strand at 405.084 kb on + strand at 405.084 kb on + strand at 405.084 kb on + strand at 405.084 kb on + strand at 405.084 kb on + strand at 405.085 kb on - strand at 405.146 kb on + strand at 405.147 kb on - strand at 405.253 kb on - strand, within ABZR87_RS01910 at 405.281 kb on - strand, within ABZR87_RS01910 at 405.622 kb on + strand, within ABZR87_RS01910 at 405.717 kb on + strand at 405.717 kb on + strand at 405.717 kb on + strand at 405.717 kb on + strand at 405.717 kb on + strand at 405.717 kb on + strand at 405.717 kb on + strand at 405.717 kb on + strand at 405.717 kb on + strand at 405.718 kb on - strand at 405.718 kb on - strand at 405.718 kb on - strand at 405.718 kb on - strand at 405.718 kb on - strand at 405.718 kb on - strand at 405.718 kb on - strand at 405.718 kb on - strand at 405.718 kb on - strand at 405.718 kb on - strand at 405.718 kb on - strand at 405.751 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction butyrate (C) remove 405,084 + +0.4 405,084 + -1.1 405,084 + +1.7 405,084 + -0.2 405,084 + +0.5 405,084 + -0.6 405,085 - +0.8 405,146 + +0.1 405,147 - +0.4 405,253 - ABZR87_RS01910 0.15 +1.0 405,281 - ABZR87_RS01910 0.20 +0.1 405,622 + ABZR87_RS01910 0.88 +1.3 405,717 + +0.7 405,717 + +0.9 405,717 + -0.1 405,717 + -0.3 405,717 + -0.3 405,717 + +0.5 405,717 + +0.3 405,717 + -1.4 405,717 + +1.7 405,718 - -1.4 405,718 - +0.5 405,718 - -0.7 405,718 - -0.5 405,718 - -0.2 405,718 - +1.5 405,718 - +0.5 405,718 - +1.1 405,718 - +0.9 405,718 - -0.1 405,718 - +0.6 405,751 - +1.1
Or see this region's nucleotide sequence