Experiment: KB with Gossypetin 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4208 and Psyr_4209 are separated by 83 nucleotides Psyr_4209 and Psyr_4210 are separated by 261 nucleotides
Psyr_4208: Psyr_4208 - heme catalase/peroxidase, at 5,010,725 to 5,012,995
_4208
Psyr_4209: Psyr_4209 - PAC motif:Bacterial chemotaxis sensory transducer, at 5,013,079 to 5,014,383
_4209
Psyr_4210: Psyr_4210 - sodium/proton antiporter, NhaA family, at 5,014,645 to 5,015,823
_4210
Position (kb) 5013
5014
5015 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 5012.215 kb on + strand, within Psyr_4208 at 5012.216 kb on - strand, within Psyr_4208 at 5012.216 kb on - strand, within Psyr_4208 at 5012.216 kb on - strand, within Psyr_4208 at 5012.216 kb on - strand, within Psyr_4208 at 5012.216 kb on - strand, within Psyr_4208 at 5012.338 kb on + strand, within Psyr_4208 at 5012.573 kb on + strand, within Psyr_4208 at 5012.573 kb on + strand, within Psyr_4208 at 5012.573 kb on + strand, within Psyr_4208 at 5012.573 kb on + strand, within Psyr_4208 at 5012.574 kb on - strand, within Psyr_4208 at 5012.574 kb on - strand, within Psyr_4208 at 5012.574 kb on - strand, within Psyr_4208 at 5012.574 kb on - strand, within Psyr_4208 at 5012.574 kb on - strand, within Psyr_4208 at 5012.574 kb on - strand, within Psyr_4208 at 5012.574 kb on - strand, within Psyr_4208 at 5012.646 kb on + strand, within Psyr_4208 at 5012.646 kb on + strand, within Psyr_4208 at 5012.646 kb on + strand, within Psyr_4208 at 5012.647 kb on - strand, within Psyr_4208 at 5012.647 kb on - strand, within Psyr_4208 at 5012.797 kb on + strand at 5012.903 kb on + strand at 5012.903 kb on + strand at 5012.903 kb on + strand at 5012.903 kb on + strand at 5012.904 kb on - strand at 5012.904 kb on - strand at 5012.904 kb on - strand at 5012.904 kb on - strand at 5012.904 kb on - strand at 5012.998 kb on + strand at 5012.998 kb on + strand at 5012.998 kb on + strand at 5012.998 kb on + strand at 5012.998 kb on + strand at 5012.998 kb on + strand at 5012.998 kb on + strand at 5012.998 kb on + strand at 5012.999 kb on - strand at 5012.999 kb on - strand at 5012.999 kb on - strand at 5012.999 kb on - strand at 5012.999 kb on - strand at 5012.999 kb on - strand at 5012.999 kb on - strand at 5012.999 kb on - strand at 5012.999 kb on - strand at 5013.078 kb on - strand at 5013.249 kb on + strand, within Psyr_4209 at 5013.259 kb on + strand, within Psyr_4209 at 5013.259 kb on + strand, within Psyr_4209 at 5013.259 kb on + strand, within Psyr_4209 at 5013.260 kb on - strand, within Psyr_4209 at 5013.260 kb on - strand, within Psyr_4209 at 5013.260 kb on - strand, within Psyr_4209 at 5013.260 kb on - strand, within Psyr_4209 at 5013.260 kb on - strand, within Psyr_4209 at 5013.260 kb on - strand, within Psyr_4209 at 5013.260 kb on - strand, within Psyr_4209 at 5013.260 kb on - strand, within Psyr_4209 at 5013.260 kb on - strand, within Psyr_4209 at 5013.260 kb on - strand, within Psyr_4209 at 5013.260 kb on - strand, within Psyr_4209 at 5013.569 kb on - strand, within Psyr_4209 at 5013.569 kb on - strand, within Psyr_4209 at 5013.569 kb on - strand, within Psyr_4209 at 5013.672 kb on - strand, within Psyr_4209 at 5013.723 kb on + strand, within Psyr_4209 at 5013.723 kb on + strand, within Psyr_4209 at 5013.817 kb on + strand, within Psyr_4209 at 5013.836 kb on + strand, within Psyr_4209 at 5013.836 kb on + strand, within Psyr_4209 at 5013.836 kb on + strand, within Psyr_4209 at 5013.836 kb on + strand, within Psyr_4209 at 5013.837 kb on - strand, within Psyr_4209 at 5013.837 kb on - strand, within Psyr_4209 at 5013.837 kb on - strand, within Psyr_4209 at 5013.848 kb on + strand, within Psyr_4209 at 5013.848 kb on + strand, within Psyr_4209 at 5013.849 kb on - strand, within Psyr_4209 at 5013.948 kb on + strand, within Psyr_4209 at 5013.948 kb on + strand, within Psyr_4209 at 5013.949 kb on - strand, within Psyr_4209 at 5013.985 kb on + strand, within Psyr_4209 at 5013.986 kb on - strand, within Psyr_4209 at 5013.986 kb on - strand, within Psyr_4209 at 5013.986 kb on - strand, within Psyr_4209 at 5014.218 kb on + strand, within Psyr_4209 at 5014.218 kb on + strand, within Psyr_4209 at 5014.218 kb on + strand, within Psyr_4209 at 5014.218 kb on + strand, within Psyr_4209 at 5014.219 kb on - strand, within Psyr_4209 at 5014.219 kb on - strand, within Psyr_4209 at 5014.219 kb on - strand, within Psyr_4209 at 5014.219 kb on - strand, within Psyr_4209 at 5014.219 kb on - strand, within Psyr_4209 at 5014.219 kb on - strand, within Psyr_4209 at 5014.332 kb on + strand at 5014.332 kb on + strand at 5014.332 kb on + strand at 5014.332 kb on + strand at 5014.332 kb on + strand at 5014.333 kb on - strand at 5014.333 kb on - strand at 5014.333 kb on - strand at 5014.333 kb on - strand at 5014.402 kb on - strand at 5014.464 kb on + strand at 5014.464 kb on + strand at 5014.464 kb on + strand at 5014.465 kb on - strand at 5014.616 kb on + strand at 5014.616 kb on + strand at 5014.616 kb on + strand at 5014.617 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Gossypetin 10 mM remove 5,012,215 + Psyr_4208 0.66 -0.8 5,012,216 - Psyr_4208 0.66 -0.8 5,012,216 - Psyr_4208 0.66 +0.8 5,012,216 - Psyr_4208 0.66 +0.4 5,012,216 - Psyr_4208 0.66 -0.7 5,012,216 - Psyr_4208 0.66 +1.4 5,012,338 + Psyr_4208 0.71 -0.1 5,012,573 + Psyr_4208 0.81 -0.9 5,012,573 + Psyr_4208 0.81 +0.1 5,012,573 + Psyr_4208 0.81 +0.2 5,012,573 + Psyr_4208 0.81 -0.7 5,012,574 - Psyr_4208 0.81 -0.3 5,012,574 - Psyr_4208 0.81 +1.3 5,012,574 - Psyr_4208 0.81 -0.5 5,012,574 - Psyr_4208 0.81 -0.7 5,012,574 - Psyr_4208 0.81 +0.8 5,012,574 - Psyr_4208 0.81 +0.3 5,012,574 - Psyr_4208 0.81 +0.5 5,012,646 + Psyr_4208 0.85 +0.2 5,012,646 + Psyr_4208 0.85 -0.3 5,012,646 + Psyr_4208 0.85 +1.0 5,012,647 - Psyr_4208 0.85 +2.6 5,012,647 - Psyr_4208 0.85 +1.1 5,012,797 + +0.4 5,012,903 + +0.2 5,012,903 + -1.8 5,012,903 + -4.1 5,012,903 + +0.1 5,012,904 - +0.2 5,012,904 - +0.3 5,012,904 - -0.1 5,012,904 - +0.2 5,012,904 - +0.1 5,012,998 + +0.9 5,012,998 + -0.4 5,012,998 + +1.0 5,012,998 + +1.2 5,012,998 + -1.8 5,012,998 + +0.7 5,012,998 + -0.1 5,012,998 + +0.8 5,012,999 - -1.8 5,012,999 - -2.1 5,012,999 - +1.7 5,012,999 - +0.2 5,012,999 - -1.1 5,012,999 - +0.8 5,012,999 - -0.3 5,012,999 - +1.6 5,012,999 - +0.6 5,013,078 - +1.0 5,013,249 + Psyr_4209 0.13 -1.1 5,013,259 + Psyr_4209 0.14 +0.3 5,013,259 + Psyr_4209 0.14 +0.3 5,013,259 + Psyr_4209 0.14 -1.3 5,013,260 - Psyr_4209 0.14 -0.4 5,013,260 - Psyr_4209 0.14 +0.4 5,013,260 - Psyr_4209 0.14 +1.0 5,013,260 - Psyr_4209 0.14 -0.0 5,013,260 - Psyr_4209 0.14 +1.2 5,013,260 - Psyr_4209 0.14 +0.5 5,013,260 - Psyr_4209 0.14 -0.7 5,013,260 - Psyr_4209 0.14 +0.4 5,013,260 - Psyr_4209 0.14 -1.9 5,013,260 - Psyr_4209 0.14 +0.7 5,013,260 - Psyr_4209 0.14 -0.1 5,013,569 - Psyr_4209 0.38 +1.2 5,013,569 - Psyr_4209 0.38 -0.4 5,013,569 - Psyr_4209 0.38 +3.3 5,013,672 - Psyr_4209 0.45 -0.1 5,013,723 + Psyr_4209 0.49 -0.2 5,013,723 + Psyr_4209 0.49 +0.3 5,013,817 + Psyr_4209 0.57 +1.8 5,013,836 + Psyr_4209 0.58 +0.8 5,013,836 + Psyr_4209 0.58 +0.3 5,013,836 + Psyr_4209 0.58 +0.6 5,013,836 + Psyr_4209 0.58 -2.0 5,013,837 - Psyr_4209 0.58 +1.5 5,013,837 - Psyr_4209 0.58 +0.2 5,013,837 - Psyr_4209 0.58 -0.3 5,013,848 + Psyr_4209 0.59 +0.2 5,013,848 + Psyr_4209 0.59 -0.3 5,013,849 - Psyr_4209 0.59 +2.2 5,013,948 + Psyr_4209 0.67 -0.2 5,013,948 + Psyr_4209 0.67 +0.4 5,013,949 - Psyr_4209 0.67 +0.0 5,013,985 + Psyr_4209 0.69 +0.7 5,013,986 - Psyr_4209 0.70 +0.5 5,013,986 - Psyr_4209 0.70 +1.4 5,013,986 - Psyr_4209 0.70 +0.8 5,014,218 + Psyr_4209 0.87 -0.6 5,014,218 + Psyr_4209 0.87 -0.7 5,014,218 + Psyr_4209 0.87 +0.2 5,014,218 + Psyr_4209 0.87 +1.3 5,014,219 - Psyr_4209 0.87 -0.4 5,014,219 - Psyr_4209 0.87 +1.4 5,014,219 - Psyr_4209 0.87 -0.4 5,014,219 - Psyr_4209 0.87 -0.1 5,014,219 - Psyr_4209 0.87 -1.3 5,014,219 - Psyr_4209 0.87 +0.8 5,014,332 + +0.1 5,014,332 + -0.2 5,014,332 + -0.3 5,014,332 + +1.5 5,014,332 + -0.2 5,014,333 - -1.8 5,014,333 - -0.5 5,014,333 - +0.5 5,014,333 - -0.3 5,014,402 - -0.2 5,014,464 + -0.3 5,014,464 + +2.3 5,014,464 + +0.6 5,014,465 - -0.2 5,014,616 + -0.8 5,014,616 + +0.6 5,014,616 + -0.7 5,014,617 - +0.2
Or see this region's nucleotide sequence