Experiment: KB with Gossypetin 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_0515 and Psyr_0516 are separated by 175 nucleotides Psyr_0516 and Psyr_0517 are separated by 277 nucleotides
Psyr_0515: Psyr_0515 - HI0933-like protein, at 571,412 to 572,590
_0515
Psyr_0516: Psyr_0516 - ATP-dependent RNA helicase DbpA, at 572,766 to 574,187
_0516
Psyr_0517: Psyr_0517 - Dihydrolipoamide acetyltransferase, at 574,465 to 576,138
_0517
Position (kb) 572
573
574
575 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 572.424 kb on + strand, within Psyr_0515 at 572.424 kb on + strand, within Psyr_0515 at 572.424 kb on + strand, within Psyr_0515 at 572.424 kb on + strand, within Psyr_0515 at 572.424 kb on + strand, within Psyr_0515 at 572.424 kb on + strand, within Psyr_0515 at 572.424 kb on + strand, within Psyr_0515 at 572.424 kb on + strand, within Psyr_0515 at 572.425 kb on - strand, within Psyr_0515 at 572.425 kb on - strand, within Psyr_0515 at 572.428 kb on + strand, within Psyr_0515 at 572.428 kb on + strand, within Psyr_0515 at 572.428 kb on + strand, within Psyr_0515 at 572.428 kb on + strand, within Psyr_0515 at 572.428 kb on + strand, within Psyr_0515 at 572.428 kb on + strand, within Psyr_0515 at 572.429 kb on - strand, within Psyr_0515 at 572.429 kb on - strand, within Psyr_0515 at 572.429 kb on - strand, within Psyr_0515 at 572.429 kb on - strand, within Psyr_0515 at 572.429 kb on - strand, within Psyr_0515 at 572.429 kb on - strand, within Psyr_0515 at 572.429 kb on - strand, within Psyr_0515 at 572.429 kb on - strand, within Psyr_0515 at 572.429 kb on - strand, within Psyr_0515 at 572.570 kb on + strand at 572.570 kb on + strand at 572.570 kb on + strand at 572.571 kb on - strand at 572.571 kb on - strand at 572.571 kb on - strand at 572.644 kb on + strand at 572.644 kb on + strand at 572.645 kb on - strand at 572.645 kb on - strand at 572.645 kb on - strand at 572.645 kb on - strand at 572.715 kb on + strand at 572.715 kb on + strand at 572.715 kb on + strand at 572.715 kb on + strand at 572.715 kb on + strand at 572.715 kb on + strand at 572.715 kb on + strand at 572.715 kb on + strand at 572.715 kb on + strand at 572.715 kb on + strand at 572.715 kb on + strand at 572.716 kb on - strand at 572.716 kb on - strand at 572.716 kb on - strand at 572.716 kb on - strand at 572.716 kb on - strand at 572.716 kb on - strand at 572.716 kb on - strand at 572.716 kb on - strand at 572.716 kb on - strand at 572.716 kb on - strand at 572.716 kb on - strand at 572.716 kb on - strand at 572.716 kb on - strand at 572.716 kb on - strand at 572.716 kb on - strand at 572.716 kb on - strand at 572.716 kb on - strand at 572.716 kb on - strand at 572.716 kb on - strand at 572.717 kb on + strand at 572.717 kb on + strand at 572.718 kb on - strand at 572.718 kb on - strand at 572.718 kb on - strand at 572.718 kb on - strand at 572.718 kb on - strand at 572.718 kb on - strand at 572.718 kb on - strand at 572.738 kb on + strand at 572.768 kb on - strand at 572.861 kb on - strand at 573.269 kb on + strand, within Psyr_0516 at 573.270 kb on - strand, within Psyr_0516 at 573.295 kb on - strand, within Psyr_0516 at 573.438 kb on + strand, within Psyr_0516 at 573.439 kb on - strand, within Psyr_0516 at 573.652 kb on + strand, within Psyr_0516 at 573.653 kb on - strand, within Psyr_0516 at 573.653 kb on - strand, within Psyr_0516 at 573.653 kb on - strand, within Psyr_0516 at 573.744 kb on + strand, within Psyr_0516 at 573.744 kb on + strand, within Psyr_0516 at 573.744 kb on + strand, within Psyr_0516 at 573.744 kb on + strand, within Psyr_0516 at 573.744 kb on + strand, within Psyr_0516 at 573.744 kb on + strand, within Psyr_0516 at 573.745 kb on - strand, within Psyr_0516 at 573.745 kb on - strand, within Psyr_0516 at 573.745 kb on - strand, within Psyr_0516 at 573.745 kb on - strand, within Psyr_0516 at 573.746 kb on + strand, within Psyr_0516 at 573.746 kb on + strand, within Psyr_0516 at 573.746 kb on + strand, within Psyr_0516 at 573.747 kb on - strand, within Psyr_0516 at 574.177 kb on + strand at 574.178 kb on - strand at 574.182 kb on + strand at 574.182 kb on + strand at 574.182 kb on + strand at 574.182 kb on + strand at 574.183 kb on - strand at 574.252 kb on + strand at 574.252 kb on + strand at 574.253 kb on - strand at 574.253 kb on - strand at 574.429 kb on + strand at 574.429 kb on + strand at 574.430 kb on - strand at 574.430 kb on - strand at 574.430 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Gossypetin 10 mM remove 572,424 + Psyr_0515 0.86 -2.1 572,424 + Psyr_0515 0.86 -1.4 572,424 + Psyr_0515 0.86 +0.3 572,424 + Psyr_0515 0.86 +0.2 572,424 + Psyr_0515 0.86 -0.6 572,424 + Psyr_0515 0.86 +0.3 572,424 + Psyr_0515 0.86 +0.4 572,424 + Psyr_0515 0.86 +0.8 572,425 - Psyr_0515 0.86 -0.4 572,425 - Psyr_0515 0.86 -2.1 572,428 + Psyr_0515 0.86 +1.6 572,428 + Psyr_0515 0.86 -1.0 572,428 + Psyr_0515 0.86 -1.7 572,428 + Psyr_0515 0.86 +0.9 572,428 + Psyr_0515 0.86 +0.6 572,428 + Psyr_0515 0.86 -0.6 572,429 - Psyr_0515 0.86 +0.3 572,429 - Psyr_0515 0.86 -0.1 572,429 - Psyr_0515 0.86 +0.2 572,429 - Psyr_0515 0.86 -1.1 572,429 - Psyr_0515 0.86 +0.1 572,429 - Psyr_0515 0.86 +1.8 572,429 - Psyr_0515 0.86 +0.1 572,429 - Psyr_0515 0.86 +2.4 572,429 - Psyr_0515 0.86 -0.3 572,570 + -0.2 572,570 + -0.4 572,570 + +0.2 572,571 - -1.1 572,571 - -0.5 572,571 - +0.4 572,644 + +0.9 572,644 + +0.2 572,645 - -1.4 572,645 - -0.5 572,645 - -1.6 572,645 - +1.4 572,715 + -1.0 572,715 + -0.4 572,715 + -0.2 572,715 + -0.4 572,715 + +0.5 572,715 + -0.3 572,715 + +0.2 572,715 + -0.2 572,715 + +0.1 572,715 + -0.6 572,715 + -2.0 572,716 - -0.7 572,716 - +0.7 572,716 - -0.6 572,716 - +0.3 572,716 - -1.0 572,716 - +0.2 572,716 - -0.2 572,716 - -2.9 572,716 - +1.3 572,716 - +0.3 572,716 - -1.3 572,716 - +0.5 572,716 - +1.1 572,716 - +1.4 572,716 - -1.4 572,716 - +1.4 572,716 - +0.5 572,716 - -0.5 572,716 - +1.0 572,717 + +0.4 572,717 + +1.0 572,718 - -0.2 572,718 - +1.3 572,718 - +2.2 572,718 - -0.6 572,718 - +0.4 572,718 - +0.2 572,718 - -0.8 572,738 + -1.6 572,768 - -0.4 572,861 - -1.3 573,269 + Psyr_0516 0.35 -1.0 573,270 - Psyr_0516 0.35 -0.6 573,295 - Psyr_0516 0.37 +1.5 573,438 + Psyr_0516 0.47 +1.2 573,439 - Psyr_0516 0.47 +0.3 573,652 + Psyr_0516 0.62 -0.4 573,653 - Psyr_0516 0.62 +1.3 573,653 - Psyr_0516 0.62 +0.1 573,653 - Psyr_0516 0.62 +0.4 573,744 + Psyr_0516 0.69 +0.2 573,744 + Psyr_0516 0.69 -2.0 573,744 + Psyr_0516 0.69 +0.7 573,744 + Psyr_0516 0.69 +0.9 573,744 + Psyr_0516 0.69 -0.8 573,744 + Psyr_0516 0.69 +0.7 573,745 - Psyr_0516 0.69 +0.8 573,745 - Psyr_0516 0.69 -0.3 573,745 - Psyr_0516 0.69 +0.9 573,745 - Psyr_0516 0.69 -1.6 573,746 + Psyr_0516 0.69 +0.5 573,746 + Psyr_0516 0.69 +2.5 573,746 + Psyr_0516 0.69 +1.1 573,747 - Psyr_0516 0.69 -0.5 574,177 + +0.1 574,178 - -0.3 574,182 + +2.2 574,182 + +1.7 574,182 + +0.6 574,182 + +2.1 574,183 - -0.3 574,252 + +1.5 574,252 + -1.1 574,253 - -0.0 574,253 - +0.6 574,429 + -1.7 574,429 + +0.7 574,430 - +0.9 574,430 - +0.5 574,430 - +0.3
Or see this region's nucleotide sequence