Experiment: DinoMM minimal media
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_p187g151 and HP15_p187g152 are separated by 303 nucleotides HP15_p187g152 and HP15_p187g153 are separated by 553 nucleotides
HP15_p187g151: HP15_p187g151 - conserved hypothetical protein, at 151,874 to 153,103
_p187g151
HP15_p187g152: HP15_p187g152 - hypothetical protein, at 153,407 to 154,279
_p187g152
HP15_p187g153: HP15_p187g153 - hypothetical protein, at 154,833 to 155,483
_p187g153
Position (kb) 153
154
155 Strain fitness (log2 ratio) -1
0
1
2
3
4 at 152.424 kb on - strand, within HP15_p187g151 at 152.464 kb on + strand, within HP15_p187g151 at 152.471 kb on - strand, within HP15_p187g151 at 152.547 kb on + strand, within HP15_p187g151 at 152.570 kb on + strand, within HP15_p187g151 at 152.575 kb on - strand, within HP15_p187g151 at 152.580 kb on + strand, within HP15_p187g151 at 152.580 kb on + strand, within HP15_p187g151 at 152.580 kb on + strand, within HP15_p187g151 at 152.588 kb on - strand, within HP15_p187g151 at 152.588 kb on - strand, within HP15_p187g151 at 152.592 kb on + strand, within HP15_p187g151 at 152.637 kb on + strand, within HP15_p187g151 at 152.652 kb on + strand, within HP15_p187g151 at 152.657 kb on - strand, within HP15_p187g151 at 152.657 kb on - strand, within HP15_p187g151 at 152.679 kb on - strand, within HP15_p187g151 at 152.682 kb on + strand, within HP15_p187g151 at 152.690 kb on - strand, within HP15_p187g151 at 152.690 kb on - strand, within HP15_p187g151 at 152.690 kb on - strand, within HP15_p187g151 at 152.692 kb on + strand, within HP15_p187g151 at 152.700 kb on - strand, within HP15_p187g151 at 152.712 kb on - strand, within HP15_p187g151 at 152.737 kb on - strand, within HP15_p187g151 at 152.809 kb on + strand, within HP15_p187g151 at 152.818 kb on + strand, within HP15_p187g151 at 152.846 kb on - strand, within HP15_p187g151 at 152.851 kb on - strand, within HP15_p187g151 at 152.857 kb on + strand, within HP15_p187g151 at 152.857 kb on + strand, within HP15_p187g151 at 152.865 kb on - strand, within HP15_p187g151 at 152.923 kb on + strand, within HP15_p187g151 at 152.931 kb on - strand, within HP15_p187g151 at 152.965 kb on - strand, within HP15_p187g151 at 152.991 kb on + strand at 153.019 kb on + strand at 153.027 kb on - strand at 153.027 kb on - strand at 153.027 kb on - strand at 153.131 kb on + strand at 153.131 kb on + strand at 153.131 kb on + strand at 153.139 kb on - strand at 153.159 kb on + strand at 153.167 kb on - strand at 153.219 kb on + strand at 153.219 kb on + strand at 153.227 kb on - strand at 153.227 kb on - strand at 153.227 kb on - strand at 153.266 kb on + strand at 153.280 kb on - strand at 153.280 kb on - strand at 153.300 kb on - strand at 153.300 kb on - strand at 153.325 kb on + strand at 153.333 kb on + strand at 153.355 kb on - strand at 153.444 kb on + strand at 153.456 kb on + strand at 153.468 kb on + strand at 153.469 kb on + strand at 153.482 kb on - strand at 153.500 kb on - strand, within HP15_p187g152 at 153.554 kb on + strand, within HP15_p187g152 at 153.559 kb on + strand, within HP15_p187g152 at 153.567 kb on - strand, within HP15_p187g152 at 153.599 kb on - strand, within HP15_p187g152 at 153.615 kb on + strand, within HP15_p187g152 at 153.635 kb on + strand, within HP15_p187g152 at 153.635 kb on + strand, within HP15_p187g152 at 153.673 kb on + strand, within HP15_p187g152 at 153.673 kb on + strand, within HP15_p187g152 at 153.876 kb on + strand, within HP15_p187g152 at 153.926 kb on + strand, within HP15_p187g152 at 153.983 kb on + strand, within HP15_p187g152 at 153.986 kb on - strand, within HP15_p187g152 at 153.991 kb on + strand, within HP15_p187g152 at 153.991 kb on + strand, within HP15_p187g152 at 153.991 kb on - strand, within HP15_p187g152 at 153.991 kb on - strand, within HP15_p187g152 at 153.991 kb on - strand, within HP15_p187g152 at 153.999 kb on - strand, within HP15_p187g152 at 153.999 kb on - strand, within HP15_p187g152 at 154.009 kb on + strand, within HP15_p187g152 at 154.090 kb on + strand, within HP15_p187g152 at 154.095 kb on + strand, within HP15_p187g152 at 154.098 kb on - strand, within HP15_p187g152 at 154.103 kb on - strand, within HP15_p187g152 at 154.110 kb on - strand, within HP15_p187g152 at 154.124 kb on + strand, within HP15_p187g152 at 154.124 kb on + strand, within HP15_p187g152 at 154.132 kb on - strand, within HP15_p187g152 at 154.137 kb on - strand, within HP15_p187g152 at 154.156 kb on + strand, within HP15_p187g152 at 154.156 kb on - strand, within HP15_p187g152 at 154.163 kb on + strand, within HP15_p187g152 at 154.195 kb on + strand at 154.240 kb on - strand at 154.267 kb on + strand at 154.349 kb on + strand at 154.357 kb on - strand at 154.357 kb on - strand at 154.440 kb on + strand at 154.440 kb on + strand at 154.440 kb on + strand at 154.446 kb on - strand at 154.450 kb on + strand at 154.450 kb on - strand at 154.453 kb on - strand at 154.513 kb on + strand at 154.514 kb on - strand at 154.514 kb on - strand at 154.514 kb on - strand at 154.533 kb on - strand at 154.540 kb on + strand at 154.558 kb on + strand at 154.604 kb on - strand at 154.668 kb on - strand at 154.676 kb on - strand at 154.699 kb on + strand at 154.714 kb on - strand at 154.921 kb on + strand, within HP15_p187g153 at 154.921 kb on + strand, within HP15_p187g153 at 154.929 kb on - strand, within HP15_p187g153 at 154.929 kb on - strand, within HP15_p187g153 at 154.943 kb on + strand, within HP15_p187g153 at 154.943 kb on + strand, within HP15_p187g153 at 154.955 kb on + strand, within HP15_p187g153 at 154.995 kb on - strand, within HP15_p187g153 at 155.065 kb on + strand, within HP15_p187g153 at 155.073 kb on - strand, within HP15_p187g153 at 155.073 kb on - strand, within HP15_p187g153 at 155.122 kb on - strand, within HP15_p187g153 at 155.133 kb on + strand, within HP15_p187g153 at 155.220 kb on - strand, within HP15_p187g153 at 155.269 kb on + strand, within HP15_p187g153 at 155.275 kb on - strand, within HP15_p187g153 at 155.277 kb on - strand, within HP15_p187g153
Per-strain Table
Position Strand Gene LocusTag Fraction DinoMM minimal media remove 152,424 - HP15_p187g151 0.45 -0.1 152,464 + HP15_p187g151 0.48 -0.9 152,471 - HP15_p187g151 0.49 -0.3 152,547 + HP15_p187g151 0.55 +1.3 152,570 + HP15_p187g151 0.57 +1.4 152,575 - HP15_p187g151 0.57 +2.6 152,580 + HP15_p187g151 0.57 -0.1 152,580 + HP15_p187g151 0.57 -1.1 152,580 + HP15_p187g151 0.57 -0.8 152,588 - HP15_p187g151 0.58 +2.2 152,588 - HP15_p187g151 0.58 +0.7 152,592 + HP15_p187g151 0.58 +1.0 152,637 + HP15_p187g151 0.62 -0.8 152,652 + HP15_p187g151 0.63 +0.7 152,657 - HP15_p187g151 0.64 +1.1 152,657 - HP15_p187g151 0.64 -0.5 152,679 - HP15_p187g151 0.65 +0.8 152,682 + HP15_p187g151 0.66 +1.0 152,690 - HP15_p187g151 0.66 +0.5 152,690 - HP15_p187g151 0.66 +0.8 152,690 - HP15_p187g151 0.66 +0.6 152,692 + HP15_p187g151 0.67 -0.4 152,700 - HP15_p187g151 0.67 -0.3 152,712 - HP15_p187g151 0.68 +1.4 152,737 - HP15_p187g151 0.70 +0.7 152,809 + HP15_p187g151 0.76 +1.6 152,818 + HP15_p187g151 0.77 +0.2 152,846 - HP15_p187g151 0.79 +0.6 152,851 - HP15_p187g151 0.79 -0.0 152,857 + HP15_p187g151 0.80 -0.7 152,857 + HP15_p187g151 0.80 +2.1 152,865 - HP15_p187g151 0.81 +0.0 152,923 + HP15_p187g151 0.85 +0.9 152,931 - HP15_p187g151 0.86 -0.6 152,965 - HP15_p187g151 0.89 +2.2 152,991 + +0.3 153,019 + +1.1 153,027 - +2.0 153,027 - -0.5 153,027 - -0.8 153,131 + -0.3 153,131 + -0.2 153,131 + -0.0 153,139 - +0.6 153,159 + +1.6 153,167 - +0.2 153,219 + +0.2 153,219 + +0.9 153,227 - +0.5 153,227 - +0.8 153,227 - +1.8 153,266 + -0.4 153,280 - +1.2 153,280 - -0.3 153,300 - +0.0 153,300 - -0.7 153,325 + +1.9 153,333 + -1.0 153,355 - +1.3 153,444 + +0.2 153,456 + -0.6 153,468 + -0.8 153,469 + +0.4 153,482 - +0.5 153,500 - HP15_p187g152 0.11 +2.4 153,554 + HP15_p187g152 0.17 +1.7 153,559 + HP15_p187g152 0.17 +0.5 153,567 - HP15_p187g152 0.18 +0.6 153,599 - HP15_p187g152 0.22 -0.2 153,615 + HP15_p187g152 0.24 -1.3 153,635 + HP15_p187g152 0.26 +1.5 153,635 + HP15_p187g152 0.26 +1.0 153,673 + HP15_p187g152 0.30 +0.5 153,673 + HP15_p187g152 0.30 -0.2 153,876 + HP15_p187g152 0.54 +1.8 153,926 + HP15_p187g152 0.59 +1.5 153,983 + HP15_p187g152 0.66 -1.2 153,986 - HP15_p187g152 0.66 +0.2 153,991 + HP15_p187g152 0.67 +1.2 153,991 + HP15_p187g152 0.67 +2.5 153,991 - HP15_p187g152 0.67 +1.2 153,991 - HP15_p187g152 0.67 +1.5 153,991 - HP15_p187g152 0.67 +2.9 153,999 - HP15_p187g152 0.68 +1.6 153,999 - HP15_p187g152 0.68 +0.8 154,009 + HP15_p187g152 0.69 +1.6 154,090 + HP15_p187g152 0.78 +2.0 154,095 + HP15_p187g152 0.79 -0.2 154,098 - HP15_p187g152 0.79 +1.8 154,103 - HP15_p187g152 0.80 +0.0 154,110 - HP15_p187g152 0.81 +1.7 154,124 + HP15_p187g152 0.82 +1.2 154,124 + HP15_p187g152 0.82 -0.8 154,132 - HP15_p187g152 0.83 +1.4 154,137 - HP15_p187g152 0.84 +1.7 154,156 + HP15_p187g152 0.86 -0.2 154,156 - HP15_p187g152 0.86 +0.8 154,163 + HP15_p187g152 0.87 +0.8 154,195 + +1.8 154,240 - -0.9 154,267 + +0.2 154,349 + -0.6 154,357 - +1.2 154,357 - -0.2 154,440 + -1.3 154,440 + +0.5 154,440 + -0.5 154,446 - +0.6 154,450 + +0.8 154,450 - -0.3 154,453 - +0.7 154,513 + +2.8 154,514 - +3.8 154,514 - -0.7 154,514 - +0.6 154,533 - -0.3 154,540 + -0.8 154,558 + +1.0 154,604 - +1.2 154,668 - +0.9 154,676 - -1.0 154,699 + +0.4 154,714 - -0.4 154,921 + HP15_p187g153 0.14 +1.5 154,921 + HP15_p187g153 0.14 -0.2 154,929 - HP15_p187g153 0.15 +0.0 154,929 - HP15_p187g153 0.15 -0.6 154,943 + HP15_p187g153 0.17 +1.6 154,943 + HP15_p187g153 0.17 -0.2 154,955 + HP15_p187g153 0.19 -0.6 154,995 - HP15_p187g153 0.25 -1.6 155,065 + HP15_p187g153 0.36 -0.1 155,073 - HP15_p187g153 0.37 -1.5 155,073 - HP15_p187g153 0.37 +0.3 155,122 - HP15_p187g153 0.44 -0.3 155,133 + HP15_p187g153 0.46 +0.8 155,220 - HP15_p187g153 0.59 +1.4 155,269 + HP15_p187g153 0.67 +0.7 155,275 - HP15_p187g153 0.68 -0.5 155,277 - HP15_p187g153 0.68 +1.0
Or see this region's nucleotide sequence