Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS14060 and ABZR87_RS14065 are separated by 169 nucleotides ABZR87_RS14065 and ABZR87_RS14070 are separated by 80 nucleotides
ABZR87_RS14060: ABZR87_RS14060 - exopolyphosphatase, at 2,966,344 to 2,967,882
_RS14060
ABZR87_RS14065: ABZR87_RS14065 - polyphosphate kinase 1, at 2,968,052 to 2,970,223
_RS14065
ABZR87_RS14070: ABZR87_RS14070 - phosphate regulon sensor histidine kinase PhoR, at 2,970,304 to 2,971,632
_RS14070
Position (kb)
2968
2969
2970
2971 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2967.314 kb on + strand, within ABZR87_RS14060 at 2967.315 kb on - strand, within ABZR87_RS14060 at 2967.315 kb on - strand, within ABZR87_RS14060 at 2967.315 kb on - strand, within ABZR87_RS14060 at 2967.371 kb on + strand, within ABZR87_RS14060 at 2967.371 kb on + strand, within ABZR87_RS14060 at 2967.372 kb on - strand, within ABZR87_RS14060 at 2967.372 kb on - strand, within ABZR87_RS14060 at 2967.372 kb on - strand, within ABZR87_RS14060 at 2967.398 kb on + strand, within ABZR87_RS14060 at 2967.399 kb on - strand, within ABZR87_RS14060 at 2967.399 kb on - strand, within ABZR87_RS14060 at 2967.423 kb on + strand, within ABZR87_RS14060 at 2967.494 kb on + strand, within ABZR87_RS14060 at 2967.495 kb on - strand, within ABZR87_RS14060 at 2967.495 kb on - strand, within ABZR87_RS14060 at 2967.495 kb on - strand, within ABZR87_RS14060 at 2967.704 kb on + strand, within ABZR87_RS14060 at 2967.705 kb on - strand, within ABZR87_RS14060 at 2967.708 kb on + strand, within ABZR87_RS14060 at 2967.708 kb on + strand, within ABZR87_RS14060 at 2967.708 kb on + strand, within ABZR87_RS14060 at 2967.709 kb on - strand, within ABZR87_RS14060 at 2967.709 kb on - strand, within ABZR87_RS14060 at 2967.709 kb on - strand, within ABZR87_RS14060 at 2967.922 kb on + strand at 2967.923 kb on - strand at 2967.952 kb on + strand at 2967.952 kb on + strand at 2967.953 kb on - strand at 2967.953 kb on - strand at 2967.960 kb on + strand at 2967.960 kb on + strand at 2967.961 kb on - strand at 2967.961 kb on - strand at 2967.961 kb on - strand at 2968.013 kb on - strand at 2968.013 kb on - strand at 2968.337 kb on + strand, within ABZR87_RS14065 at 2968.337 kb on + strand, within ABZR87_RS14065 at 2968.337 kb on + strand, within ABZR87_RS14065 at 2968.337 kb on + strand, within ABZR87_RS14065 at 2968.337 kb on + strand, within ABZR87_RS14065 at 2968.337 kb on + strand, within ABZR87_RS14065 at 2968.337 kb on + strand, within ABZR87_RS14065 at 2968.338 kb on - strand, within ABZR87_RS14065 at 2968.338 kb on - strand, within ABZR87_RS14065 at 2968.338 kb on - strand, within ABZR87_RS14065 at 2968.338 kb on - strand, within ABZR87_RS14065 at 2968.646 kb on + strand, within ABZR87_RS14065 at 2968.653 kb on - strand, within ABZR87_RS14065 at 2968.653 kb on - strand, within ABZR87_RS14065 at 2968.719 kb on + strand, within ABZR87_RS14065 at 2968.719 kb on + strand, within ABZR87_RS14065 at 2968.720 kb on - strand, within ABZR87_RS14065 at 2968.720 kb on - strand, within ABZR87_RS14065 at 2968.720 kb on - strand, within ABZR87_RS14065 at 2968.720 kb on - strand, within ABZR87_RS14065 at 2968.720 kb on - strand, within ABZR87_RS14065 at 2968.720 kb on - strand, within ABZR87_RS14065 at 2968.720 kb on - strand, within ABZR87_RS14065 at 2968.730 kb on + strand, within ABZR87_RS14065 at 2968.925 kb on + strand, within ABZR87_RS14065 at 2969.000 kb on + strand, within ABZR87_RS14065 at 2969.177 kb on + strand, within ABZR87_RS14065 at 2969.177 kb on + strand, within ABZR87_RS14065 at 2969.178 kb on - strand, within ABZR87_RS14065 at 2969.336 kb on + strand, within ABZR87_RS14065 at 2969.429 kb on + strand, within ABZR87_RS14065 at 2969.453 kb on + strand, within ABZR87_RS14065 at 2969.453 kb on + strand, within ABZR87_RS14065 at 2969.454 kb on - strand, within ABZR87_RS14065 at 2969.454 kb on - strand, within ABZR87_RS14065 at 2969.454 kb on - strand, within ABZR87_RS14065 at 2969.454 kb on - strand, within ABZR87_RS14065 at 2969.477 kb on + strand, within ABZR87_RS14065 at 2969.478 kb on - strand, within ABZR87_RS14065 at 2969.478 kb on - strand, within ABZR87_RS14065 at 2969.723 kb on + strand, within ABZR87_RS14065 at 2969.724 kb on - strand, within ABZR87_RS14065 at 2969.724 kb on - strand, within ABZR87_RS14065 at 2969.793 kb on + strand, within ABZR87_RS14065 at 2969.794 kb on - strand, within ABZR87_RS14065 at 2969.861 kb on + strand, within ABZR87_RS14065 at 2969.864 kb on + strand, within ABZR87_RS14065 at 2969.864 kb on + strand, within ABZR87_RS14065 at 2969.864 kb on + strand, within ABZR87_RS14065 at 2969.864 kb on + strand, within ABZR87_RS14065 at 2969.864 kb on + strand, within ABZR87_RS14065 at 2969.864 kb on + strand, within ABZR87_RS14065 at 2969.865 kb on - strand, within ABZR87_RS14065 at 2969.865 kb on - strand, within ABZR87_RS14065 at 2969.894 kb on + strand, within ABZR87_RS14065 at 2969.894 kb on + strand, within ABZR87_RS14065 at 2970.284 kb on + strand at 2970.528 kb on + strand, within ABZR87_RS14070 at 2970.529 kb on - strand, within ABZR87_RS14070 at 2970.529 kb on - strand, within ABZR87_RS14070 at 2970.529 kb on - strand, within ABZR87_RS14070 at 2970.569 kb on + strand, within ABZR87_RS14070 at 2970.570 kb on - strand, within ABZR87_RS14070 at 2970.609 kb on + strand, within ABZR87_RS14070 at 2970.753 kb on + strand, within ABZR87_RS14070 at 2970.882 kb on + strand, within ABZR87_RS14070 at 2970.883 kb on - strand, within ABZR87_RS14070 at 2970.883 kb on - strand, within ABZR87_RS14070 at 2970.883 kb on - strand, within ABZR87_RS14070 at 2970.883 kb on - strand, within ABZR87_RS14070 at 2970.883 kb on - strand, within ABZR87_RS14070 at 2970.900 kb on - strand, within ABZR87_RS14070 at 2971.079 kb on + strand, within ABZR87_RS14070 at 2971.204 kb on - strand, within ABZR87_RS14070
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 2,967,314 + ABZR87_RS14060 0.63 -0.4 2,967,315 - ABZR87_RS14060 0.63 +0.2 2,967,315 - ABZR87_RS14060 0.63 +0.8 2,967,315 - ABZR87_RS14060 0.63 +1.0 2,967,371 + ABZR87_RS14060 0.67 -2.6 2,967,371 + ABZR87_RS14060 0.67 +0.5 2,967,372 - ABZR87_RS14060 0.67 +1.2 2,967,372 - ABZR87_RS14060 0.67 +0.3 2,967,372 - ABZR87_RS14060 0.67 -0.5 2,967,398 + ABZR87_RS14060 0.68 -0.5 2,967,399 - ABZR87_RS14060 0.69 +0.1 2,967,399 - ABZR87_RS14060 0.69 -1.2 2,967,423 + ABZR87_RS14060 0.70 -0.3 2,967,494 + ABZR87_RS14060 0.75 -1.5 2,967,495 - ABZR87_RS14060 0.75 -0.1 2,967,495 - ABZR87_RS14060 0.75 -0.2 2,967,495 - ABZR87_RS14060 0.75 -0.2 2,967,704 + ABZR87_RS14060 0.88 -0.5 2,967,705 - ABZR87_RS14060 0.88 +0.1 2,967,708 + ABZR87_RS14060 0.89 -1.4 2,967,708 + ABZR87_RS14060 0.89 -0.7 2,967,708 + ABZR87_RS14060 0.89 -1.1 2,967,709 - ABZR87_RS14060 0.89 -0.7 2,967,709 - ABZR87_RS14060 0.89 -0.8 2,967,709 - ABZR87_RS14060 0.89 -1.0 2,967,922 + +0.2 2,967,923 - +0.6 2,967,952 + -0.3 2,967,952 + -1.1 2,967,953 - +0.5 2,967,953 - +0.3 2,967,960 + -0.4 2,967,960 + -1.5 2,967,961 - -0.7 2,967,961 - +1.1 2,967,961 - -0.9 2,968,013 - -0.2 2,968,013 - +0.5 2,968,337 + ABZR87_RS14065 0.13 -0.7 2,968,337 + ABZR87_RS14065 0.13 +1.3 2,968,337 + ABZR87_RS14065 0.13 -0.1 2,968,337 + ABZR87_RS14065 0.13 -0.4 2,968,337 + ABZR87_RS14065 0.13 +1.0 2,968,337 + ABZR87_RS14065 0.13 -0.2 2,968,337 + ABZR87_RS14065 0.13 -1.7 2,968,338 - ABZR87_RS14065 0.13 -0.8 2,968,338 - ABZR87_RS14065 0.13 -0.0 2,968,338 - ABZR87_RS14065 0.13 +1.2 2,968,338 - ABZR87_RS14065 0.13 -0.3 2,968,646 + ABZR87_RS14065 0.27 +0.2 2,968,653 - ABZR87_RS14065 0.28 +1.3 2,968,653 - ABZR87_RS14065 0.28 -1.2 2,968,719 + ABZR87_RS14065 0.31 -0.2 2,968,719 + ABZR87_RS14065 0.31 +0.9 2,968,720 - ABZR87_RS14065 0.31 -0.3 2,968,720 - ABZR87_RS14065 0.31 +0.3 2,968,720 - ABZR87_RS14065 0.31 +0.7 2,968,720 - ABZR87_RS14065 0.31 -0.1 2,968,720 - ABZR87_RS14065 0.31 +0.8 2,968,720 - ABZR87_RS14065 0.31 +2.8 2,968,720 - ABZR87_RS14065 0.31 +0.9 2,968,730 + ABZR87_RS14065 0.31 +0.2 2,968,925 + ABZR87_RS14065 0.40 +0.1 2,969,000 + ABZR87_RS14065 0.44 +1.3 2,969,177 + ABZR87_RS14065 0.52 -0.5 2,969,177 + ABZR87_RS14065 0.52 +0.5 2,969,178 - ABZR87_RS14065 0.52 +1.3 2,969,336 + ABZR87_RS14065 0.59 +0.1 2,969,429 + ABZR87_RS14065 0.63 +0.8 2,969,453 + ABZR87_RS14065 0.65 +0.3 2,969,453 + ABZR87_RS14065 0.65 +0.9 2,969,454 - ABZR87_RS14065 0.65 +0.3 2,969,454 - ABZR87_RS14065 0.65 -0.2 2,969,454 - ABZR87_RS14065 0.65 +1.4 2,969,454 - ABZR87_RS14065 0.65 +0.8 2,969,477 + ABZR87_RS14065 0.66 -0.4 2,969,478 - ABZR87_RS14065 0.66 +0.5 2,969,478 - ABZR87_RS14065 0.66 +0.4 2,969,723 + ABZR87_RS14065 0.77 +1.0 2,969,724 - ABZR87_RS14065 0.77 +0.6 2,969,724 - ABZR87_RS14065 0.77 +1.5 2,969,793 + ABZR87_RS14065 0.80 +0.3 2,969,794 - ABZR87_RS14065 0.80 +0.7 2,969,861 + ABZR87_RS14065 0.83 -0.4 2,969,864 + ABZR87_RS14065 0.83 -0.9 2,969,864 + ABZR87_RS14065 0.83 -0.3 2,969,864 + ABZR87_RS14065 0.83 -1.0 2,969,864 + ABZR87_RS14065 0.83 +0.4 2,969,864 + ABZR87_RS14065 0.83 +0.3 2,969,864 + ABZR87_RS14065 0.83 +0.8 2,969,865 - ABZR87_RS14065 0.83 +0.5 2,969,865 - ABZR87_RS14065 0.83 -0.3 2,969,894 + ABZR87_RS14065 0.85 +0.7 2,969,894 + ABZR87_RS14065 0.85 -0.3 2,970,284 + +0.9 2,970,528 + ABZR87_RS14070 0.17 -0.1 2,970,529 - ABZR87_RS14070 0.17 -0.7 2,970,529 - ABZR87_RS14070 0.17 -0.0 2,970,529 - ABZR87_RS14070 0.17 -0.3 2,970,569 + ABZR87_RS14070 0.20 +0.5 2,970,570 - ABZR87_RS14070 0.20 +0.3 2,970,609 + ABZR87_RS14070 0.23 +0.5 2,970,753 + ABZR87_RS14070 0.34 +1.5 2,970,882 + ABZR87_RS14070 0.43 -0.5 2,970,883 - ABZR87_RS14070 0.44 -1.9 2,970,883 - ABZR87_RS14070 0.44 -0.4 2,970,883 - ABZR87_RS14070 0.44 +0.2 2,970,883 - ABZR87_RS14070 0.44 +0.3 2,970,883 - ABZR87_RS14070 0.44 +0.2 2,970,900 - ABZR87_RS14070 0.45 -0.3 2,971,079 + ABZR87_RS14070 0.58 -0.1 2,971,204 - ABZR87_RS14070 0.68 -0.4
Or see this region's nucleotide sequence