Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS10565 and ABZR87_RS10570 are separated by 11 nucleotides ABZR87_RS10570 and ABZR87_RS10575 are separated by 47 nucleotides ABZR87_RS10575 and ABZR87_RS10580 are separated by 5 nucleotides
ABZR87_RS10565: ABZR87_RS10565 - cupin domain-containing protein, at 2,234,388 to 2,235,617
_RS10565
ABZR87_RS10570: ABZR87_RS10570 - peptidylprolyl isomerase, at 2,235,629 to 2,236,156
_RS10570
ABZR87_RS10575: ABZR87_RS10575 - metallophosphoesterase, at 2,236,204 to 2,237,280
_RS10575
ABZR87_RS10580: ABZR87_RS10580 - DNA mismatch repair protein MutS, at 2,237,286 to 2,239,928
_RS10580
Position (kb)
2236
2237
2238 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2235.418 kb on - strand, within ABZR87_RS10565 at 2235.601 kb on - strand at 2235.646 kb on + strand at 2235.647 kb on - strand at 2235.665 kb on + strand at 2235.665 kb on + strand at 2235.666 kb on - strand at 2235.722 kb on + strand, within ABZR87_RS10570 at 2235.722 kb on + strand, within ABZR87_RS10570 at 2235.722 kb on + strand, within ABZR87_RS10570 at 2235.723 kb on - strand, within ABZR87_RS10570 at 2235.723 kb on - strand, within ABZR87_RS10570 at 2235.723 kb on - strand, within ABZR87_RS10570 at 2235.723 kb on - strand, within ABZR87_RS10570 at 2235.723 kb on - strand, within ABZR87_RS10570 at 2235.723 kb on - strand, within ABZR87_RS10570 at 2235.723 kb on - strand, within ABZR87_RS10570 at 2235.723 kb on - strand, within ABZR87_RS10570 at 2235.737 kb on + strand, within ABZR87_RS10570 at 2235.738 kb on - strand, within ABZR87_RS10570 at 2235.792 kb on - strand, within ABZR87_RS10570 at 2235.837 kb on - strand, within ABZR87_RS10570 at 2235.837 kb on - strand, within ABZR87_RS10570 at 2235.951 kb on - strand, within ABZR87_RS10570 at 2236.167 kb on - strand at 2236.340 kb on + strand, within ABZR87_RS10575 at 2236.340 kb on + strand, within ABZR87_RS10575 at 2236.340 kb on + strand, within ABZR87_RS10575 at 2236.341 kb on - strand, within ABZR87_RS10575 at 2236.341 kb on - strand, within ABZR87_RS10575 at 2236.341 kb on - strand, within ABZR87_RS10575 at 2236.341 kb on - strand, within ABZR87_RS10575 at 2236.452 kb on - strand, within ABZR87_RS10575 at 2236.493 kb on + strand, within ABZR87_RS10575 at 2236.494 kb on - strand, within ABZR87_RS10575 at 2236.494 kb on - strand, within ABZR87_RS10575 at 2236.519 kb on + strand, within ABZR87_RS10575 at 2236.675 kb on + strand, within ABZR87_RS10575 at 2236.677 kb on - strand, within ABZR87_RS10575 at 2236.677 kb on - strand, within ABZR87_RS10575 at 2236.706 kb on + strand, within ABZR87_RS10575 at 2236.707 kb on - strand, within ABZR87_RS10575 at 2236.707 kb on - strand, within ABZR87_RS10575 at 2236.824 kb on + strand, within ABZR87_RS10575 at 2236.824 kb on + strand, within ABZR87_RS10575 at 2236.825 kb on - strand, within ABZR87_RS10575 at 2236.825 kb on - strand, within ABZR87_RS10575 at 2236.825 kb on - strand, within ABZR87_RS10575 at 2236.825 kb on - strand, within ABZR87_RS10575 at 2236.825 kb on - strand, within ABZR87_RS10575 at 2236.856 kb on + strand, within ABZR87_RS10575 at 2236.952 kb on + strand, within ABZR87_RS10575 at 2236.952 kb on + strand, within ABZR87_RS10575 at 2236.953 kb on - strand, within ABZR87_RS10575 at 2236.953 kb on - strand, within ABZR87_RS10575 at 2236.953 kb on - strand, within ABZR87_RS10575 at 2236.953 kb on - strand, within ABZR87_RS10575 at 2236.953 kb on - strand, within ABZR87_RS10575 at 2236.953 kb on - strand, within ABZR87_RS10575 at 2237.321 kb on - strand at 2237.573 kb on - strand, within ABZR87_RS10580 at 2237.698 kb on + strand, within ABZR87_RS10580 at 2237.699 kb on - strand, within ABZR87_RS10580 at 2237.699 kb on - strand, within ABZR87_RS10580 at 2237.980 kb on + strand, within ABZR87_RS10580 at 2237.980 kb on + strand, within ABZR87_RS10580 at 2237.981 kb on - strand, within ABZR87_RS10580 at 2238.027 kb on - strand, within ABZR87_RS10580 at 2238.027 kb on - strand, within ABZR87_RS10580
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 2,235,418 - ABZR87_RS10565 0.84 -2.5 2,235,601 - -0.4 2,235,646 + -1.0 2,235,647 - +0.2 2,235,665 + -1.1 2,235,665 + +0.0 2,235,666 - +0.1 2,235,722 + ABZR87_RS10570 0.18 -1.1 2,235,722 + ABZR87_RS10570 0.18 -1.0 2,235,722 + ABZR87_RS10570 0.18 -1.7 2,235,723 - ABZR87_RS10570 0.18 -0.5 2,235,723 - ABZR87_RS10570 0.18 +0.7 2,235,723 - ABZR87_RS10570 0.18 -0.1 2,235,723 - ABZR87_RS10570 0.18 +1.4 2,235,723 - ABZR87_RS10570 0.18 -2.8 2,235,723 - ABZR87_RS10570 0.18 -1.3 2,235,723 - ABZR87_RS10570 0.18 -0.4 2,235,723 - ABZR87_RS10570 0.18 -0.2 2,235,737 + ABZR87_RS10570 0.20 -0.8 2,235,738 - ABZR87_RS10570 0.21 -0.4 2,235,792 - ABZR87_RS10570 0.31 -0.1 2,235,837 - ABZR87_RS10570 0.39 +0.5 2,235,837 - ABZR87_RS10570 0.39 -2.1 2,235,951 - ABZR87_RS10570 0.61 -0.7 2,236,167 - +0.1 2,236,340 + ABZR87_RS10575 0.13 +0.6 2,236,340 + ABZR87_RS10575 0.13 +0.3 2,236,340 + ABZR87_RS10575 0.13 +0.3 2,236,341 - ABZR87_RS10575 0.13 -0.7 2,236,341 - ABZR87_RS10575 0.13 -0.1 2,236,341 - ABZR87_RS10575 0.13 -0.0 2,236,341 - ABZR87_RS10575 0.13 -0.2 2,236,452 - ABZR87_RS10575 0.23 -0.1 2,236,493 + ABZR87_RS10575 0.27 -0.4 2,236,494 - ABZR87_RS10575 0.27 +0.0 2,236,494 - ABZR87_RS10575 0.27 -0.2 2,236,519 + ABZR87_RS10575 0.29 -1.3 2,236,675 + ABZR87_RS10575 0.44 -0.2 2,236,677 - ABZR87_RS10575 0.44 +0.6 2,236,677 - ABZR87_RS10575 0.44 +1.1 2,236,706 + ABZR87_RS10575 0.47 -0.2 2,236,707 - ABZR87_RS10575 0.47 -0.5 2,236,707 - ABZR87_RS10575 0.47 +0.1 2,236,824 + ABZR87_RS10575 0.58 -0.1 2,236,824 + ABZR87_RS10575 0.58 +0.0 2,236,825 - ABZR87_RS10575 0.58 +0.1 2,236,825 - ABZR87_RS10575 0.58 -2.1 2,236,825 - ABZR87_RS10575 0.58 -0.8 2,236,825 - ABZR87_RS10575 0.58 +0.9 2,236,825 - ABZR87_RS10575 0.58 +0.0 2,236,856 + ABZR87_RS10575 0.61 +0.9 2,236,952 + ABZR87_RS10575 0.69 +0.4 2,236,952 + ABZR87_RS10575 0.69 +0.2 2,236,953 - ABZR87_RS10575 0.70 -0.6 2,236,953 - ABZR87_RS10575 0.70 -0.6 2,236,953 - ABZR87_RS10575 0.70 +0.4 2,236,953 - ABZR87_RS10575 0.70 -0.7 2,236,953 - ABZR87_RS10575 0.70 +0.5 2,236,953 - ABZR87_RS10575 0.70 +0.3 2,237,321 - -0.6 2,237,573 - ABZR87_RS10580 0.11 +0.6 2,237,698 + ABZR87_RS10580 0.16 -0.0 2,237,699 - ABZR87_RS10580 0.16 +0.8 2,237,699 - ABZR87_RS10580 0.16 +0.3 2,237,980 + ABZR87_RS10580 0.26 +0.1 2,237,980 + ABZR87_RS10580 0.26 +2.0 2,237,981 - ABZR87_RS10580 0.26 -0.1 2,238,027 - ABZR87_RS10580 0.28 +0.2 2,238,027 - ABZR87_RS10580 0.28 +0.0
Or see this region's nucleotide sequence