Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS10330 and ABZR87_RS10335 overlap by 1 nucleotides ABZR87_RS10335 and ABZR87_RS10340 are separated by 14 nucleotides
ABZR87_RS10330: ABZR87_RS10330 - porin, at 2,190,748 to 2,191,956
_RS10330
ABZR87_RS10335: ABZR87_RS10335 - aldose 1-epimerase, at 2,191,956 to 2,192,891
_RS10335
ABZR87_RS10340: ABZR87_RS10340 - LysR family transcriptional regulator, at 2,192,906 to 2,193,820
_RS10340
Position (kb)
2191
2192
2193 Strain fitness (log2 ratio)
-2
-1
0
1 at 2190.964 kb on + strand, within ABZR87_RS10330 at 2191.078 kb on + strand, within ABZR87_RS10330 at 2191.078 kb on + strand, within ABZR87_RS10330 at 2191.078 kb on + strand, within ABZR87_RS10330 at 2191.079 kb on - strand, within ABZR87_RS10330 at 2191.102 kb on + strand, within ABZR87_RS10330 at 2191.102 kb on + strand, within ABZR87_RS10330 at 2191.102 kb on + strand, within ABZR87_RS10330 at 2191.102 kb on + strand, within ABZR87_RS10330 at 2191.103 kb on - strand, within ABZR87_RS10330 at 2191.103 kb on - strand, within ABZR87_RS10330 at 2191.129 kb on + strand, within ABZR87_RS10330 at 2191.130 kb on - strand, within ABZR87_RS10330 at 2191.130 kb on - strand, within ABZR87_RS10330 at 2191.130 kb on - strand, within ABZR87_RS10330 at 2191.130 kb on - strand, within ABZR87_RS10330 at 2191.147 kb on + strand, within ABZR87_RS10330 at 2191.148 kb on - strand, within ABZR87_RS10330 at 2191.255 kb on + strand, within ABZR87_RS10330 at 2191.256 kb on - strand, within ABZR87_RS10330 at 2191.256 kb on - strand, within ABZR87_RS10330 at 2191.256 kb on - strand, within ABZR87_RS10330 at 2191.256 kb on - strand, within ABZR87_RS10330 at 2191.360 kb on + strand, within ABZR87_RS10330 at 2191.361 kb on - strand, within ABZR87_RS10330 at 2191.366 kb on + strand, within ABZR87_RS10330 at 2191.532 kb on - strand, within ABZR87_RS10330 at 2191.533 kb on + strand, within ABZR87_RS10330 at 2191.533 kb on + strand, within ABZR87_RS10330 at 2191.534 kb on - strand, within ABZR87_RS10330 at 2191.534 kb on - strand, within ABZR87_RS10330 at 2191.579 kb on + strand, within ABZR87_RS10330 at 2191.579 kb on + strand, within ABZR87_RS10330 at 2191.579 kb on + strand, within ABZR87_RS10330 at 2191.580 kb on - strand, within ABZR87_RS10330 at 2191.580 kb on - strand, within ABZR87_RS10330 at 2191.627 kb on - strand, within ABZR87_RS10330 at 2191.648 kb on + strand, within ABZR87_RS10330 at 2191.648 kb on + strand, within ABZR87_RS10330 at 2191.649 kb on - strand, within ABZR87_RS10330 at 2191.690 kb on + strand, within ABZR87_RS10330 at 2191.690 kb on + strand, within ABZR87_RS10330 at 2191.691 kb on - strand, within ABZR87_RS10330 at 2191.691 kb on - strand, within ABZR87_RS10330 at 2191.736 kb on - strand, within ABZR87_RS10330 at 2191.736 kb on - strand, within ABZR87_RS10330 at 2191.762 kb on + strand, within ABZR87_RS10330 at 2191.763 kb on - strand, within ABZR87_RS10330 at 2191.804 kb on + strand, within ABZR87_RS10330 at 2191.804 kb on + strand, within ABZR87_RS10330 at 2191.804 kb on + strand, within ABZR87_RS10330 at 2191.805 kb on - strand, within ABZR87_RS10330 at 2191.896 kb on + strand at 2191.961 kb on + strand at 2191.962 kb on - strand at 2192.166 kb on + strand, within ABZR87_RS10335 at 2192.167 kb on - strand, within ABZR87_RS10335 at 2192.167 kb on - strand, within ABZR87_RS10335 at 2192.340 kb on + strand, within ABZR87_RS10335 at 2192.340 kb on + strand, within ABZR87_RS10335 at 2192.340 kb on + strand, within ABZR87_RS10335 at 2192.341 kb on - strand, within ABZR87_RS10335 at 2192.341 kb on - strand, within ABZR87_RS10335 at 2192.436 kb on - strand, within ABZR87_RS10335 at 2192.481 kb on + strand, within ABZR87_RS10335 at 2192.634 kb on + strand, within ABZR87_RS10335 at 2192.635 kb on - strand, within ABZR87_RS10335 at 2192.635 kb on - strand, within ABZR87_RS10335 at 2192.635 kb on - strand, within ABZR87_RS10335 at 2192.637 kb on + strand, within ABZR87_RS10335 at 2192.638 kb on - strand, within ABZR87_RS10335 at 2192.748 kb on + strand, within ABZR87_RS10335 at 2192.749 kb on - strand, within ABZR87_RS10335 at 2193.006 kb on + strand, within ABZR87_RS10340 at 2193.007 kb on - strand, within ABZR87_RS10340 at 2193.214 kb on - strand, within ABZR87_RS10340 at 2193.309 kb on + strand, within ABZR87_RS10340 at 2193.822 kb on - strand at 2193.842 kb on - strand at 2193.883 kb on + strand at 2193.883 kb on + strand at 2193.883 kb on + strand at 2193.883 kb on + strand at 2193.884 kb on - strand at 2193.884 kb on - strand at 2193.884 kb on - strand at 2193.884 kb on - strand at 2193.884 kb on - strand at 2193.884 kb on - strand at 2193.884 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 2,190,964 + ABZR87_RS10330 0.18 -1.0 2,191,078 + ABZR87_RS10330 0.27 +0.1 2,191,078 + ABZR87_RS10330 0.27 -0.4 2,191,078 + ABZR87_RS10330 0.27 -2.0 2,191,079 - ABZR87_RS10330 0.27 +0.2 2,191,102 + ABZR87_RS10330 0.29 +0.0 2,191,102 + ABZR87_RS10330 0.29 -0.6 2,191,102 + ABZR87_RS10330 0.29 -0.3 2,191,102 + ABZR87_RS10330 0.29 +0.1 2,191,103 - ABZR87_RS10330 0.29 -0.3 2,191,103 - ABZR87_RS10330 0.29 +0.1 2,191,129 + ABZR87_RS10330 0.32 -1.3 2,191,130 - ABZR87_RS10330 0.32 +0.3 2,191,130 - ABZR87_RS10330 0.32 -0.1 2,191,130 - ABZR87_RS10330 0.32 +0.7 2,191,130 - ABZR87_RS10330 0.32 +1.0 2,191,147 + ABZR87_RS10330 0.33 -0.5 2,191,148 - ABZR87_RS10330 0.33 +0.1 2,191,255 + ABZR87_RS10330 0.42 +0.3 2,191,256 - ABZR87_RS10330 0.42 -0.8 2,191,256 - ABZR87_RS10330 0.42 +0.2 2,191,256 - ABZR87_RS10330 0.42 +1.4 2,191,256 - ABZR87_RS10330 0.42 -0.4 2,191,360 + ABZR87_RS10330 0.51 -0.3 2,191,361 - ABZR87_RS10330 0.51 +0.4 2,191,366 + ABZR87_RS10330 0.51 -0.2 2,191,532 - ABZR87_RS10330 0.65 +0.7 2,191,533 + ABZR87_RS10330 0.65 -0.2 2,191,533 + ABZR87_RS10330 0.65 +0.4 2,191,534 - ABZR87_RS10330 0.65 +0.5 2,191,534 - ABZR87_RS10330 0.65 +0.6 2,191,579 + ABZR87_RS10330 0.69 +0.4 2,191,579 + ABZR87_RS10330 0.69 +0.3 2,191,579 + ABZR87_RS10330 0.69 +1.2 2,191,580 - ABZR87_RS10330 0.69 -0.0 2,191,580 - ABZR87_RS10330 0.69 +0.5 2,191,627 - ABZR87_RS10330 0.73 +0.4 2,191,648 + ABZR87_RS10330 0.74 +0.1 2,191,648 + ABZR87_RS10330 0.74 -0.3 2,191,649 - ABZR87_RS10330 0.75 -0.7 2,191,690 + ABZR87_RS10330 0.78 +0.6 2,191,690 + ABZR87_RS10330 0.78 +0.3 2,191,691 - ABZR87_RS10330 0.78 +0.1 2,191,691 - ABZR87_RS10330 0.78 +0.1 2,191,736 - ABZR87_RS10330 0.82 +1.7 2,191,736 - ABZR87_RS10330 0.82 +0.0 2,191,762 + ABZR87_RS10330 0.84 -1.2 2,191,763 - ABZR87_RS10330 0.84 -0.5 2,191,804 + ABZR87_RS10330 0.87 +0.6 2,191,804 + ABZR87_RS10330 0.87 +0.6 2,191,804 + ABZR87_RS10330 0.87 +0.0 2,191,805 - ABZR87_RS10330 0.87 -0.8 2,191,896 + -0.0 2,191,961 + -1.5 2,191,962 - +0.1 2,192,166 + ABZR87_RS10335 0.22 -0.5 2,192,167 - ABZR87_RS10335 0.23 -0.7 2,192,167 - ABZR87_RS10335 0.23 -0.3 2,192,340 + ABZR87_RS10335 0.41 -0.9 2,192,340 + ABZR87_RS10335 0.41 -0.4 2,192,340 + ABZR87_RS10335 0.41 -0.1 2,192,341 - ABZR87_RS10335 0.41 +0.3 2,192,341 - ABZR87_RS10335 0.41 -0.6 2,192,436 - ABZR87_RS10335 0.51 -0.7 2,192,481 + ABZR87_RS10335 0.56 +0.3 2,192,634 + ABZR87_RS10335 0.72 -0.9 2,192,635 - ABZR87_RS10335 0.73 -0.5 2,192,635 - ABZR87_RS10335 0.73 -0.5 2,192,635 - ABZR87_RS10335 0.73 +0.0 2,192,637 + ABZR87_RS10335 0.73 -0.6 2,192,638 - ABZR87_RS10335 0.73 +0.1 2,192,748 + ABZR87_RS10335 0.85 -1.5 2,192,749 - ABZR87_RS10335 0.85 -0.8 2,193,006 + ABZR87_RS10340 0.11 +0.1 2,193,007 - ABZR87_RS10340 0.11 +0.4 2,193,214 - ABZR87_RS10340 0.34 -0.6 2,193,309 + ABZR87_RS10340 0.44 -0.3 2,193,822 - -1.5 2,193,842 - +0.1 2,193,883 + -0.0 2,193,883 + +0.3 2,193,883 + +0.1 2,193,883 + -0.2 2,193,884 - -0.5 2,193,884 - -0.2 2,193,884 - -0.1 2,193,884 - +0.9 2,193,884 - +0.1 2,193,884 - -1.7 2,193,884 - -0.2
Or see this region's nucleotide sequence