Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS10110 and ABZR87_RS10115 are separated by 3 nucleotides ABZR87_RS10115 and ABZR87_RS10120 are separated by 190 nucleotides ABZR87_RS10120 and ABZR87_RS10125 are separated by 115 nucleotides ABZR87_RS10125 and ABZR87_RS10130 are separated by 190 nucleotides
ABZR87_RS10110: ABZR87_RS10110 - SAM-dependent methyltransferase, at 2,148,694 to 2,149,425
_RS10110
ABZR87_RS10115: ABZR87_RS10115 - Maf-like protein, at 2,149,429 to 2,150,025
_RS10115
ABZR87_RS10120: ABZR87_RS10120 - YceD family protein, at 2,150,216 to 2,150,752
_RS10120
ABZR87_RS10125: ABZR87_RS10125 - 50S ribosomal protein L32, at 2,150,868 to 2,151,047
_RS10125
ABZR87_RS10130: ABZR87_RS10130 - phosphate acyltransferase PlsX, at 2,151,238 to 2,152,299
_RS10130
Position (kb)
2150
2151 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2149.276 kb on + strand, within ABZR87_RS10110 at 2149.314 kb on - strand, within ABZR87_RS10110 at 2149.314 kb on - strand, within ABZR87_RS10110 at 2149.390 kb on + strand at 2149.390 kb on + strand at 2149.390 kb on + strand at 2149.390 kb on + strand at 2149.390 kb on + strand at 2149.391 kb on - strand at 2149.391 kb on - strand at 2149.391 kb on - strand at 2149.395 kb on + strand at 2149.395 kb on + strand at 2149.396 kb on - strand at 2149.409 kb on + strand at 2149.409 kb on + strand at 2149.409 kb on + strand at 2149.410 kb on - strand at 2149.410 kb on - strand at 2149.416 kb on + strand at 2149.416 kb on + strand at 2149.417 kb on - strand at 2150.025 kb on - strand at 2150.026 kb on - strand at 2150.026 kb on - strand at 2150.088 kb on + strand at 2150.088 kb on + strand at 2150.089 kb on - strand at 2150.204 kb on + strand at 2150.204 kb on + strand at 2150.204 kb on + strand at 2150.205 kb on - strand at 2150.344 kb on + strand, within ABZR87_RS10120 at 2150.481 kb on - strand, within ABZR87_RS10120 at 2150.481 kb on - strand, within ABZR87_RS10120 at 2150.764 kb on + strand at 2150.764 kb on + strand at 2150.785 kb on + strand at 2150.785 kb on + strand at 2151.171 kb on + strand at 2151.171 kb on + strand at 2151.184 kb on - strand at 2151.184 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 2,149,276 + ABZR87_RS10110 0.80 +0.2 2,149,314 - ABZR87_RS10110 0.85 -1.7 2,149,314 - ABZR87_RS10110 0.85 -0.8 2,149,390 + -0.1 2,149,390 + -1.1 2,149,390 + +0.6 2,149,390 + -0.1 2,149,390 + -1.4 2,149,391 - -0.4 2,149,391 - +0.0 2,149,391 - +0.5 2,149,395 + -0.6 2,149,395 + -1.6 2,149,396 - +1.7 2,149,409 + -0.8 2,149,409 + -0.3 2,149,409 + +0.3 2,149,410 - -0.0 2,149,410 - +0.4 2,149,416 + -0.9 2,149,416 + +0.3 2,149,417 - -0.7 2,150,025 - -0.6 2,150,026 - -0.7 2,150,026 - +2.4 2,150,088 + -0.7 2,150,088 + +0.0 2,150,089 - -2.2 2,150,204 + -0.8 2,150,204 + -0.9 2,150,204 + -0.5 2,150,205 - -2.6 2,150,344 + ABZR87_RS10120 0.24 -2.1 2,150,481 - ABZR87_RS10120 0.49 -1.9 2,150,481 - ABZR87_RS10120 0.49 -1.7 2,150,764 + -0.5 2,150,764 + -0.2 2,150,785 + +0.1 2,150,785 + -0.3 2,151,171 + -0.0 2,151,171 + +0.1 2,151,184 - -1.7 2,151,184 - -0.2
Or see this region's nucleotide sequence