Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS08745 and ABZR87_RS08750 are separated by 43 nucleotides ABZR87_RS08750 and ABZR87_RS08755 overlap by 1 nucleotides
ABZR87_RS08745: ABZR87_RS08745 - phosphomannomutase/phosphoglucomutase, at 1,859,096 to 1,860,484
_RS08745
ABZR87_RS08750: ABZR87_RS08750 - lipopolysaccharide heptosyltransferase I, at 1,860,528 to 1,861,526
_RS08750
ABZR87_RS08755: ABZR87_RS08755 - lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase, at 1,861,526 to 1,862,842
_RS08755
Position (kb)
1860
1861
1862 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1860.552 kb on - strand at 1860.596 kb on + strand at 1860.786 kb on + strand, within ABZR87_RS08750 at 1860.787 kb on - strand, within ABZR87_RS08750 at 1860.903 kb on + strand, within ABZR87_RS08750 at 1860.903 kb on + strand, within ABZR87_RS08750 at 1860.927 kb on + strand, within ABZR87_RS08750 at 1860.927 kb on + strand, within ABZR87_RS08750 at 1861.077 kb on + strand, within ABZR87_RS08750 at 1861.077 kb on + strand, within ABZR87_RS08750 at 1861.170 kb on + strand, within ABZR87_RS08750 at 1861.170 kb on + strand, within ABZR87_RS08750 at 1861.398 kb on + strand, within ABZR87_RS08750 at 1861.398 kb on + strand, within ABZR87_RS08750 at 1861.398 kb on + strand, within ABZR87_RS08750 at 1861.431 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 1,860,552 - -3.2 1,860,596 + -2.0 1,860,786 + ABZR87_RS08750 0.26 -1.4 1,860,787 - ABZR87_RS08750 0.26 -2.2 1,860,903 + ABZR87_RS08750 0.38 -1.1 1,860,903 + ABZR87_RS08750 0.38 +0.1 1,860,927 + ABZR87_RS08750 0.40 -4.7 1,860,927 + ABZR87_RS08750 0.40 -1.5 1,861,077 + ABZR87_RS08750 0.55 -1.0 1,861,077 + ABZR87_RS08750 0.55 -0.9 1,861,170 + ABZR87_RS08750 0.64 -1.2 1,861,170 + ABZR87_RS08750 0.64 -0.4 1,861,398 + ABZR87_RS08750 0.87 -2.7 1,861,398 + ABZR87_RS08750 0.87 -0.5 1,861,398 + ABZR87_RS08750 0.87 -1.3 1,861,431 + -0.2
Or see this region's nucleotide sequence