Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS05600

Experiment: propionate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	propionate (C)
1,189,228	+				-0.0
1,189,229	-				+0.9
1,189,229	-				+1.3
1,189,229	-				+0.1
1,189,229	-				-0.1
1,189,383	+		ABZR87_RS05595	0.20	+0.3
1,189,383	+		ABZR87_RS05595	0.20	+0.4
1,189,384	-		ABZR87_RS05595	0.20	-0.1
1,189,419	+		ABZR87_RS05595	0.25	+0.3
1,189,420	-		ABZR87_RS05595	0.25	-1.0
1,189,437	+		ABZR87_RS05595	0.27	-0.1
1,189,437	+		ABZR87_RS05595	0.27	+0.3
1,189,437	+		ABZR87_RS05595	0.27	+0.1
1,189,437	+		ABZR87_RS05595	0.27	+1.0
1,189,437	+		ABZR87_RS05595	0.27	-2.5
1,189,437	+		ABZR87_RS05595	0.27	-2.5
1,189,437	+		ABZR87_RS05595	0.27	-1.1
1,189,438	-		ABZR87_RS05595	0.27	-1.2
1,189,438	-		ABZR87_RS05595	0.27	-0.6
1,189,438	-		ABZR87_RS05595	0.27	+0.6
1,189,438	-		ABZR87_RS05595	0.27	+0.5
1,189,506	+		ABZR87_RS05595	0.36	+0.3
1,189,548	+		ABZR87_RS05595	0.41	+0.1
1,189,548	+		ABZR87_RS05595	0.41	-0.4
1,189,549	-		ABZR87_RS05595	0.41	+0.4
1,189,549	-		ABZR87_RS05595	0.41	-0.4
1,189,788	+		ABZR87_RS05595	0.72	+0.2
1,189,788	+		ABZR87_RS05595	0.72	+0.4
1,189,789	-		ABZR87_RS05595	0.72	-1.0
1,189,789	-		ABZR87_RS05595	0.72	-1.6
1,189,789	-		ABZR87_RS05595	0.72	-1.7
1,189,789	-		ABZR87_RS05595	0.72	-1.4
1,189,789	-		ABZR87_RS05595	0.72	-0.2
1,189,830	+		ABZR87_RS05595	0.77	-0.2
1,189,830	+		ABZR87_RS05595	0.77	+1.9
1,189,830	+		ABZR87_RS05595	0.77	-0.1
1,189,830	+		ABZR87_RS05595	0.77	-0.5
1,189,830	+		ABZR87_RS05595	0.77	-0.0
1,189,830	+		ABZR87_RS05595	0.77	-0.9
1,189,830	+		ABZR87_RS05595	0.77	-1.5
1,189,830	+		ABZR87_RS05595	0.77	+0.2
1,189,830	+		ABZR87_RS05595	0.77	-0.1
1,189,830	+		ABZR87_RS05595	0.77	+0.2
1,189,831	-		ABZR87_RS05595	0.77	+0.4
1,189,831	-		ABZR87_RS05595	0.77	+0.8
1,189,831	-		ABZR87_RS05595	0.77	+0.2
1,189,831	-		ABZR87_RS05595	0.77	+0.7
1,189,831	-		ABZR87_RS05595	0.77	+0.7
1,189,831	-		ABZR87_RS05595	0.77	-0.1
1,189,860	+		ABZR87_RS05595	0.81	+0.0
1,189,860	+		ABZR87_RS05595	0.81	+0.9
1,189,860	+		ABZR87_RS05595	0.81	+1.9
1,189,861	-		ABZR87_RS05595	0.81	-0.0
1,189,861	-		ABZR87_RS05595	0.81	+0.2
1,189,861	-		ABZR87_RS05595	0.81	-0.8
1,189,861	-		ABZR87_RS05595	0.81	+0.5
1,189,861	-		ABZR87_RS05595	0.81	-0.2
1,189,883	+		ABZR87_RS05595	0.84	+0.2
1,189,883	+		ABZR87_RS05595	0.84	-0.5
1,189,884	-		ABZR87_RS05595	0.84	+0.2
1,189,986	+				-0.7
1,189,986	+				+0.1
1,189,987	-				-0.3
1,189,987	-				-0.7
1,189,987	-				+0.4
1,190,008	-				+0.1
1,190,008	-				+0.5
1,190,063	+				-0.2
1,190,063	+				-0.5
1,190,064	-				+0.4
1,190,064	-				-0.6
1,190,064	-				+0.5
1,190,197	+				+0.1
1,190,197	+				-0.7
1,190,197	+				+0.2
1,190,197	+				-0.3
1,190,198	-				-0.8
1,190,198	-				+0.6
1,190,198	-				+0.2
1,190,198	-				+0.8
1,190,410	+		ABZR87_RS05600	0.27	-0.5
1,190,410	+		ABZR87_RS05600	0.27	-0.4
1,190,411	-		ABZR87_RS05600	0.27	-0.2
1,190,548	+		ABZR87_RS05600	0.41	-0.1
1,190,549	-		ABZR87_RS05600	0.41	+0.1
1,190,578	+		ABZR87_RS05600	0.43	-0.2
1,190,579	-		ABZR87_RS05600	0.44	+0.3
1,190,612	-		ABZR87_RS05600	0.47	+0.8
1,190,612	-		ABZR87_RS05600	0.47	+0.2
1,190,839	+		ABZR87_RS05600	0.69	+0.4
1,190,839	+		ABZR87_RS05600	0.69	+1.6
1,190,839	+		ABZR87_RS05600	0.69	+0.2
1,190,839	+		ABZR87_RS05600	0.69	-0.9
1,190,839	+		ABZR87_RS05600	0.69	-0.4
1,190,842	+		ABZR87_RS05600	0.70	-1.4
1,190,843	-		ABZR87_RS05600	0.70	-0.4
1,190,843	-		ABZR87_RS05600	0.70	+0.2
1,190,843	-		ABZR87_RS05600	0.70	-0.4
1,190,843	-		ABZR87_RS05600	0.70	-0.9
1,191,213	+				+0.4
1,191,213	+				+0.3
1,191,213	+				-0.2
1,191,213	+				-0.3
1,191,213	+				+0.0
1,191,645	+		ABZR87_RS05605	0.48	-1.2
1,191,645	+		ABZR87_RS05605	0.48	-0.3
1,191,645	+		ABZR87_RS05605	0.48	-0.7
1,191,646	-		ABZR87_RS05605	0.48	-0.1
1,191,693	+		ABZR87_RS05605	0.53	+0.8
1,191,693	+		ABZR87_RS05605	0.53	+1.2
1,191,693	+		ABZR87_RS05605	0.53	-0.3
1,191,738	+		ABZR87_RS05605	0.58	+0.6
1,191,739	-		ABZR87_RS05605	0.58	-0.2
1,191,771	+		ABZR87_RS05605	0.61	-2.4
1,191,771	+		ABZR87_RS05605	0.61	-0.6
1,191,771	+		ABZR87_RS05605	0.61	+0.5
1,191,771	+		ABZR87_RS05605	0.61	-0.9
1,191,885	+		ABZR87_RS05605	0.74	-0.3
1,191,885	+		ABZR87_RS05605	0.74	+0.0
1,191,885	+		ABZR87_RS05605	0.74	-0.2
1,191,885	+		ABZR87_RS05605	0.74	+1.7
1,191,885	+		ABZR87_RS05605	0.74	-0.2
1,191,885	+		ABZR87_RS05605	0.74	-0.3
1,191,886	-		ABZR87_RS05605	0.74	+0.2
1,191,886	-		ABZR87_RS05605	0.74	+0.2
1,191,886	-		ABZR87_RS05605	0.74	-1.4
1,191,886	-		ABZR87_RS05605	0.74	+0.9
1,191,886	-		ABZR87_RS05605	0.74	+0.1
1,191,924	+		ABZR87_RS05605	0.78	-0.3
1,191,924	+		ABZR87_RS05605	0.78	+0.3
1,191,924	+		ABZR87_RS05605	0.78	-0.0
1,191,924	+		ABZR87_RS05605	0.78	-0.4
1,191,924	+		ABZR87_RS05605	0.78	+1.1
1,191,924	+		ABZR87_RS05605	0.78	+0.1
1,191,925	-		ABZR87_RS05605	0.78	+0.2
1,191,925	-		ABZR87_RS05605	0.78	+1.5
1,191,925	-		ABZR87_RS05605	0.78	+0.4
1,191,925	-		ABZR87_RS05605	0.78	-1.3
1,191,925	-		ABZR87_RS05605	0.78	+0.4
1,191,925	-		ABZR87_RS05605	0.78	+2.6