Experiment: Myristic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc02555 and SMc02554 overlap by 4 nucleotides SMc02554 and SMc02553 overlap by 2 nucleotides SMc02553 and SMc02552 are separated by 186 nucleotides SMc02552 and SMc02551 are separated by 414 nucleotides
SMc02555: SMc02555 - signal peptide protein, at 1,206,725 to 1,207,168
SMc02555
SMc02554: SMc02554 - hypothetical protein, at 1,207,165 to 1,207,629
SMc02554
SMc02553: SMc02553 - hypothetical protein, at 1,207,628 to 1,208,458
SMc02553
SMc02552: SMc02552 - hypothetical protein, at 1,208,645 to 1,208,794
SMc02552
SMc02551: SMc02551 - cysteinyl-tRNA synthetase, at 1,209,209 to 1,210,609
SMc02551
Position (kb)
1207
1208
1209 Strain fitness (log2 ratio)
-1
0
1 at 1206.651 kb on - strand at 1206.651 kb on - strand at 1206.671 kb on - strand at 1206.718 kb on + strand at 1206.719 kb on - strand at 1206.719 kb on - strand at 1206.727 kb on - strand at 1207.400 kb on - strand, within SMc02554 at 1207.416 kb on - strand, within SMc02554 at 1207.416 kb on - strand, within SMc02554 at 1207.530 kb on - strand, within SMc02554 at 1207.530 kb on - strand, within SMc02554 at 1207.530 kb on - strand, within SMc02554 at 1207.530 kb on - strand, within SMc02554 at 1207.662 kb on - strand at 1207.662 kb on - strand at 1207.665 kb on - strand at 1207.665 kb on - strand at 1207.665 kb on - strand at 1207.665 kb on - strand at 1207.665 kb on - strand at 1207.992 kb on + strand, within SMc02553 at 1207.993 kb on - strand, within SMc02553 at 1207.993 kb on - strand, within SMc02553 at 1208.164 kb on + strand, within SMc02553 at 1208.309 kb on + strand, within SMc02553 at 1208.391 kb on + strand at 1208.391 kb on + strand at 1208.646 kb on + strand at 1208.646 kb on + strand at 1208.647 kb on - strand at 1208.832 kb on + strand at 1208.833 kb on - strand at 1208.900 kb on - strand at 1209.067 kb on + strand at 1209.076 kb on + strand at 1209.132 kb on + strand at 1209.132 kb on + strand at 1209.132 kb on + strand at 1209.171 kb on + strand at 1209.171 kb on + strand at 1209.171 kb on + strand at 1209.171 kb on + strand at 1209.173 kb on + strand at 1209.173 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Myristic (C) remove 1,206,651 - +0.0 1,206,651 - +0.2 1,206,671 - -0.5 1,206,718 + +1.3 1,206,719 - -0.8 1,206,719 - +0.6 1,206,727 - -0.7 1,207,400 - SMc02554 0.51 +0.1 1,207,416 - SMc02554 0.54 +0.0 1,207,416 - SMc02554 0.54 +0.4 1,207,530 - SMc02554 0.78 -1.0 1,207,530 - SMc02554 0.78 -0.1 1,207,530 - SMc02554 0.78 -0.0 1,207,530 - SMc02554 0.78 +0.3 1,207,662 - -1.1 1,207,662 - -0.5 1,207,665 - -0.4 1,207,665 - -0.2 1,207,665 - +0.2 1,207,665 - -0.9 1,207,665 - +0.2 1,207,992 + SMc02553 0.44 -0.3 1,207,993 - SMc02553 0.44 -0.7 1,207,993 - SMc02553 0.44 -0.3 1,208,164 + SMc02553 0.65 -0.3 1,208,309 + SMc02553 0.82 -0.6 1,208,391 + +0.5 1,208,391 + +0.2 1,208,646 + +1.0 1,208,646 + -0.2 1,208,647 - -1.2 1,208,832 + +0.2 1,208,833 - -1.0 1,208,900 - -0.3 1,209,067 + +0.3 1,209,076 + +0.3 1,209,132 + +0.3 1,209,132 + -0.2 1,209,132 + -1.1 1,209,171 + -0.6 1,209,171 + -1.7 1,209,171 + -1.6 1,209,171 + -1.5 1,209,173 + -0.6 1,209,173 + -0.8
Or see this region's nucleotide sequence