Experiment: Myristic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc00488 and SMc00487 are separated by 125 nucleotides SMc00487 and SMc00538 are separated by 414 nucleotides
SMc00488: SMc00488 - phosphoribosylformylglycinamidine synthase II, at 1,921,045 to 1,923,276
SMc00488
SMc00487: SMc00487 - hypothetical protein, at 1,923,402 to 1,923,635
SMc00487
SMc00538: SMc00538 - hypothetical protein, at 1,924,050 to 1,924,385
SMc00538
Position (kb)
1923
1924 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2 at 1922.419 kb on - strand, within SMc00488 at 1922.428 kb on + strand, within SMc00488 at 1922.428 kb on + strand, within SMc00488 at 1922.429 kb on - strand, within SMc00488 at 1922.650 kb on + strand, within SMc00488 at 1922.650 kb on + strand, within SMc00488 at 1922.650 kb on + strand, within SMc00488 at 1922.651 kb on - strand, within SMc00488 at 1922.651 kb on - strand, within SMc00488 at 1922.818 kb on + strand, within SMc00488 at 1922.819 kb on - strand, within SMc00488 at 1922.819 kb on - strand, within SMc00488 at 1922.829 kb on + strand, within SMc00488 at 1922.829 kb on + strand, within SMc00488 at 1922.831 kb on + strand, within SMc00488 at 1922.831 kb on + strand, within SMc00488 at 1922.831 kb on + strand, within SMc00488 at 1922.831 kb on + strand, within SMc00488 at 1922.831 kb on + strand, within SMc00488 at 1922.832 kb on - strand, within SMc00488 at 1922.832 kb on - strand, within SMc00488 at 1923.070 kb on + strand at 1923.070 kb on + strand at 1923.071 kb on - strand at 1923.071 kb on - strand at 1923.244 kb on + strand at 1923.244 kb on + strand at 1923.245 kb on - strand at 1923.347 kb on - strand at 1923.347 kb on - strand at 1923.499 kb on - strand, within SMc00487 at 1923.564 kb on + strand, within SMc00487 at 1923.564 kb on + strand, within SMc00487 at 1923.564 kb on + strand, within SMc00487 at 1923.565 kb on - strand, within SMc00487 at 1923.565 kb on - strand, within SMc00487 at 1923.565 kb on - strand, within SMc00487 at 1923.595 kb on + strand, within SMc00487 at 1923.596 kb on - strand, within SMc00487 at 1923.779 kb on + strand at 1923.779 kb on + strand at 1923.811 kb on - strand at 1923.884 kb on - strand at 1923.884 kb on - strand at 1923.897 kb on + strand at 1923.897 kb on + strand at 1923.898 kb on - strand at 1923.994 kb on + strand at 1923.994 kb on + strand at 1923.998 kb on + strand at 1924.362 kb on - strand at 1924.362 kb on - strand at 1924.454 kb on + strand at 1924.477 kb on + strand at 1924.597 kb on + strand at 1924.597 kb on + strand at 1924.598 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Myristic (C) remove 1,922,419 - SMc00488 0.62 -2.5 1,922,428 + SMc00488 0.62 -4.0 1,922,428 + SMc00488 0.62 -3.1 1,922,429 - SMc00488 0.62 -1.6 1,922,650 + SMc00488 0.72 -4.4 1,922,650 + SMc00488 0.72 -2.6 1,922,650 + SMc00488 0.72 -4.6 1,922,651 - SMc00488 0.72 -3.4 1,922,651 - SMc00488 0.72 -5.1 1,922,818 + SMc00488 0.79 -4.0 1,922,819 - SMc00488 0.79 -3.0 1,922,819 - SMc00488 0.79 -2.4 1,922,829 + SMc00488 0.80 -3.5 1,922,829 + SMc00488 0.80 -3.5 1,922,831 + SMc00488 0.80 -3.3 1,922,831 + SMc00488 0.80 -3.2 1,922,831 + SMc00488 0.80 +0.2 1,922,831 + SMc00488 0.80 -2.9 1,922,831 + SMc00488 0.80 -5.6 1,922,832 - SMc00488 0.80 -3.1 1,922,832 - SMc00488 0.80 -1.8 1,923,070 + -2.4 1,923,070 + -4.4 1,923,071 - -3.7 1,923,071 - -1.4 1,923,244 + -4.6 1,923,244 + -1.1 1,923,245 - -2.8 1,923,347 - +0.5 1,923,347 - +2.4 1,923,499 - SMc00487 0.41 +0.6 1,923,564 + SMc00487 0.69 -0.4 1,923,564 + SMc00487 0.69 -0.1 1,923,564 + SMc00487 0.69 +0.2 1,923,565 - SMc00487 0.70 -0.3 1,923,565 - SMc00487 0.70 +0.8 1,923,565 - SMc00487 0.70 +1.0 1,923,595 + SMc00487 0.82 +1.6 1,923,596 - SMc00487 0.83 +1.2 1,923,779 + -0.6 1,923,779 + -1.8 1,923,811 - +1.1 1,923,884 - +0.1 1,923,884 - -0.6 1,923,897 + -1.0 1,923,897 + -1.1 1,923,898 - +0.0 1,923,994 + +0.2 1,923,994 + +0.3 1,923,998 + -1.3 1,924,362 - -0.3 1,924,362 - -0.5 1,924,454 + -0.5 1,924,477 + -0.1 1,924,597 + -1.0 1,924,597 + -2.5 1,924,598 - +0.8
Or see this region's nucleotide sequence