Experiment: DinoMM minimal media
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_808 and HP15_809 are separated by 59 nucleotides HP15_809 and HP15_810 are separated by 14 nucleotides HP15_810 and HP15_811 are separated by 306 nucleotides
HP15_808: HP15_808 - flagellar synthesis regulator FleN, at 826,065 to 827,318
_808
HP15_809: HP15_809 - hypothetical protein, at 827,378 to 827,521
_809
HP15_810: HP15_810 - fatty acyl-CoA reductase 1, at 827,536 to 829,071
_810
HP15_811: HP15_811 - acetyl-CoA synthetase, at 829,378 to 831,327
_811
Position (kb) 827
828
829
830 Strain fitness (log2 ratio) -1
0
1 at 826.551 kb on - strand, within HP15_808 at 826.594 kb on + strand, within HP15_808 at 826.602 kb on - strand, within HP15_808 at 826.630 kb on + strand, within HP15_808 at 826.712 kb on + strand, within HP15_808 at 826.729 kb on + strand, within HP15_808 at 826.753 kb on + strand, within HP15_808 at 826.812 kb on - strand, within HP15_808 at 826.812 kb on - strand, within HP15_808 at 826.812 kb on - strand, within HP15_808 at 826.863 kb on - strand, within HP15_808 at 826.944 kb on + strand, within HP15_808 at 826.962 kb on - strand, within HP15_808 at 827.005 kb on - strand, within HP15_808 at 827.015 kb on - strand, within HP15_808 at 827.077 kb on - strand, within HP15_808 at 827.134 kb on - strand, within HP15_808 at 827.206 kb on + strand at 827.219 kb on + strand at 827.298 kb on + strand at 827.537 kb on + strand at 827.545 kb on - strand at 827.550 kb on + strand at 827.586 kb on + strand at 827.594 kb on - strand at 828.042 kb on - strand, within HP15_810 at 828.055 kb on - strand, within HP15_810 at 828.112 kb on + strand, within HP15_810 at 828.120 kb on - strand, within HP15_810 at 828.276 kb on - strand, within HP15_810 at 828.321 kb on - strand, within HP15_810 at 828.390 kb on + strand, within HP15_810 at 828.719 kb on - strand, within HP15_810 at 828.730 kb on + strand, within HP15_810 at 828.745 kb on + strand, within HP15_810 at 828.848 kb on + strand, within HP15_810 at 828.906 kb on + strand, within HP15_810 at 828.908 kb on - strand, within HP15_810 at 828.975 kb on - strand at 829.018 kb on - strand at 829.018 kb on - strand at 829.075 kb on + strand at 829.239 kb on + strand at 829.247 kb on - strand at 829.305 kb on + strand at 829.313 kb on - strand at 829.406 kb on + strand at 829.990 kb on + strand, within HP15_811 at 829.990 kb on + strand, within HP15_811
Per-strain Table
Position Strand Gene LocusTag Fraction DinoMM minimal media remove 826,551 - HP15_808 0.39 +0.0 826,594 + HP15_808 0.42 -0.4 826,602 - HP15_808 0.43 +0.2 826,630 + HP15_808 0.45 -1.3 826,712 + HP15_808 0.52 +0.6 826,729 + HP15_808 0.53 +0.0 826,753 + HP15_808 0.55 -0.5 826,812 - HP15_808 0.60 +0.5 826,812 - HP15_808 0.60 +1.5 826,812 - HP15_808 0.60 -1.5 826,863 - HP15_808 0.64 -0.6 826,944 + HP15_808 0.70 +1.1 826,962 - HP15_808 0.72 +0.3 827,005 - HP15_808 0.75 +1.3 827,015 - HP15_808 0.76 +1.4 827,077 - HP15_808 0.81 -0.2 827,134 - HP15_808 0.85 +0.3 827,206 + +0.0 827,219 + +1.5 827,298 + +0.3 827,537 + +0.7 827,545 - +1.2 827,550 + +0.7 827,586 + -0.4 827,594 - -0.8 828,042 - HP15_810 0.33 -0.5 828,055 - HP15_810 0.34 +0.4 828,112 + HP15_810 0.38 +1.0 828,120 - HP15_810 0.38 +1.2 828,276 - HP15_810 0.48 -0.3 828,321 - HP15_810 0.51 -0.7 828,390 + HP15_810 0.56 -0.4 828,719 - HP15_810 0.77 -0.5 828,730 + HP15_810 0.78 -0.9 828,745 + HP15_810 0.79 -1.4 828,848 + HP15_810 0.85 -1.0 828,906 + HP15_810 0.89 +1.3 828,908 - HP15_810 0.89 -0.8 828,975 - +1.3 829,018 - -0.5 829,018 - +1.2 829,075 + +1.1 829,239 + +0.7 829,247 - -0.0 829,305 + +1.1 829,313 - -1.3 829,406 + +1.1 829,990 + HP15_811 0.31 -1.1 829,990 + HP15_811 0.31 +0.7
Or see this region's nucleotide sequence