Strain Fitness in Marinobacter adhaerens HP15 around HP15_p187g74

Experiment: DinoMM minimal media

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_p187g73 and HP15_p187g74 are separated by 172 nucleotidesHP15_p187g74 and HP15_p187g75 are separated by 250 nucleotides HP15_p187g72: HP15_p187g72 - undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase, at 65,903 to 67,009 _p187g72 HP15_p187g73: HP15_p187g73 - conserved hypothetical protein, at 66,894 to 67,733 _p187g73 HP15_p187g74: HP15_p187g74 - hypothetical protein, at 67,906 to 68,238 _p187g74 HP15_p187g75: HP15_p187g75 - peptidase S8 and S53, subtilisin, kexin, sedolisin, at 68,489 to 69,832 _p187g75 Position (kb) 67 68 69Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 66.997 kb on - strandat 67.007 kb on - strandat 67.032 kb on - strand, within HP15_p187g73at 67.087 kb on - strand, within HP15_p187g73at 67.087 kb on - strand, within HP15_p187g73at 67.097 kb on + strand, within HP15_p187g73at 67.111 kb on - strand, within HP15_p187g73at 67.128 kb on + strand, within HP15_p187g73at 67.166 kb on - strand, within HP15_p187g73at 67.184 kb on + strand, within HP15_p187g73at 67.191 kb on + strand, within HP15_p187g73at 67.192 kb on - strand, within HP15_p187g73at 67.242 kb on - strand, within HP15_p187g73at 67.385 kb on - strand, within HP15_p187g73at 67.402 kb on + strand, within HP15_p187g73at 67.410 kb on + strand, within HP15_p187g73at 67.412 kb on + strand, within HP15_p187g73at 67.420 kb on - strand, within HP15_p187g73at 67.420 kb on - strand, within HP15_p187g73at 67.422 kb on - strand, within HP15_p187g73at 67.443 kb on - strand, within HP15_p187g73at 67.483 kb on - strand, within HP15_p187g73at 67.511 kb on + strand, within HP15_p187g73at 67.523 kb on + strand, within HP15_p187g73at 67.577 kb on - strand, within HP15_p187g73at 67.587 kb on + strand, within HP15_p187g73at 67.599 kb on + strand, within HP15_p187g73at 67.600 kb on - strand, within HP15_p187g73at 67.618 kb on - strand, within HP15_p187g73at 67.618 kb on - strand, within HP15_p187g73at 67.627 kb on + strand, within HP15_p187g73at 67.627 kb on + strand, within HP15_p187g73at 67.635 kb on - strand, within HP15_p187g73at 67.650 kb on + strandat 67.650 kb on - strandat 67.652 kb on + strandat 67.658 kb on - strandat 67.658 kb on - strandat 67.665 kb on - strandat 67.680 kb on + strandat 67.688 kb on - strandat 67.693 kb on - strandat 67.706 kb on + strandat 67.714 kb on - strandat 67.730 kb on + strandat 67.772 kb on + strandat 67.818 kb on + strandat 67.826 kb on + strandat 67.828 kb on + strandat 67.828 kb on + strandat 67.834 kb on - strandat 67.836 kb on - strandat 67.846 kb on - strandat 67.998 kb on + strand, within HP15_p187g74at 67.998 kb on + strand, within HP15_p187g74at 67.998 kb on + strand, within HP15_p187g74at 67.998 kb on + strand, within HP15_p187g74at 68.006 kb on - strand, within HP15_p187g74at 68.006 kb on - strand, within HP15_p187g74at 68.035 kb on + strand, within HP15_p187g74at 68.043 kb on - strand, within HP15_p187g74at 68.043 kb on - strand, within HP15_p187g74at 68.045 kb on - strand, within HP15_p187g74at 68.046 kb on + strand, within HP15_p187g74at 68.083 kb on + strand, within HP15_p187g74at 68.088 kb on - strand, within HP15_p187g74at 68.088 kb on - strand, within HP15_p187g74at 68.128 kb on - strand, within HP15_p187g74at 68.138 kb on + strand, within HP15_p187g74at 68.141 kb on - strand, within HP15_p187g74at 68.153 kb on + strand, within HP15_p187g74at 68.161 kb on - strand, within HP15_p187g74at 68.174 kb on + strand, within HP15_p187g74at 68.221 kb on + strandat 68.221 kb on + strandat 68.227 kb on - strandat 68.247 kb on - strandat 68.312 kb on + strandat 68.374 kb on + strandat 68.382 kb on - strandat 68.390 kb on - strandat 68.404 kb on + strandat 68.412 kb on - strandat 68.412 kb on - strandat 68.416 kb on + strandat 68.427 kb on - strandat 68.427 kb on - strandat 68.456 kb on - strandat 68.461 kb on - strandat 68.529 kb on - strandat 68.537 kb on + strandat 68.539 kb on - strandat 68.550 kb on - strandat 68.600 kb on + strandat 68.632 kb on + strand, within HP15_p187g75at 68.653 kb on + strand, within HP15_p187g75at 68.653 kb on + strand, within HP15_p187g75at 68.653 kb on + strand, within HP15_p187g75at 68.653 kb on + strand, within HP15_p187g75at 68.653 kb on + strand, within HP15_p187g75at 68.653 kb on + strand, within HP15_p187g75at 68.661 kb on - strand, within HP15_p187g75at 68.661 kb on - strand, within HP15_p187g75at 68.661 kb on - strand, within HP15_p187g75at 68.661 kb on - strand, within HP15_p187g75at 68.661 kb on - strand, within HP15_p187g75at 68.661 kb on - strand, within HP15_p187g75at 68.661 kb on - strand, within HP15_p187g75at 68.667 kb on + strand, within HP15_p187g75at 68.681 kb on - strand, within HP15_p187g75at 68.690 kb on + strand, within HP15_p187g75at 68.717 kb on - strand, within HP15_p187g75at 68.719 kb on - strand, within HP15_p187g75at 68.720 kb on + strand, within HP15_p187g75at 68.720 kb on + strand, within HP15_p187g75at 68.728 kb on - strand, within HP15_p187g75at 68.728 kb on - strand, within HP15_p187g75at 68.730 kb on + strand, within HP15_p187g75at 68.731 kb on + strand, within HP15_p187g75at 68.737 kb on - strand, within HP15_p187g75at 68.790 kb on - strand, within HP15_p187g75at 68.806 kb on - strand, within HP15_p187g75at 68.808 kb on - strand, within HP15_p187g75at 68.835 kb on + strand, within HP15_p187g75at 68.856 kb on - strand, within HP15_p187g75at 68.882 kb on - strand, within HP15_p187g75at 68.910 kb on + strand, within HP15_p187g75at 68.934 kb on + strand, within HP15_p187g75at 68.942 kb on - strand, within HP15_p187g75at 68.944 kb on + strand, within HP15_p187g75at 68.947 kb on - strand, within HP15_p187g75at 68.947 kb on - strand, within HP15_p187g75at 68.959 kb on + strand, within HP15_p187g75at 69.024 kb on - strand, within HP15_p187g75at 69.024 kb on - strand, within HP15_p187g75at 69.024 kb on - strand, within HP15_p187g75at 69.024 kb on - strand, within HP15_p187g75at 69.043 kb on + strand, within HP15_p187g75at 69.049 kb on + strand, within HP15_p187g75at 69.093 kb on - strand, within HP15_p187g75at 69.196 kb on + strand, within HP15_p187g75at 69.196 kb on + strand, within HP15_p187g75at 69.204 kb on - strand, within HP15_p187g75at 69.219 kb on - strand, within HP15_p187g75at 69.226 kb on - strand, within HP15_p187g75

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Per-strain Table

Position Strand Gene LocusTag Fraction DinoMM minimal media
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66,997 - +0.8
67,007 - +1.0
67,032 - HP15_p187g73 0.16 -0.3
67,087 - HP15_p187g73 0.23 -0.8
67,087 - HP15_p187g73 0.23 -0.5
67,097 + HP15_p187g73 0.24 -0.4
67,111 - HP15_p187g73 0.26 -0.1
67,128 + HP15_p187g73 0.28 +1.1
67,166 - HP15_p187g73 0.32 -1.1
67,184 + HP15_p187g73 0.35 +0.9
67,191 + HP15_p187g73 0.35 -0.2
67,192 - HP15_p187g73 0.35 -0.5
67,242 - HP15_p187g73 0.41 +0.8
67,385 - HP15_p187g73 0.58 -0.7
67,402 + HP15_p187g73 0.60 -0.7
67,410 + HP15_p187g73 0.61 +0.5
67,412 + HP15_p187g73 0.62 +0.6
67,420 - HP15_p187g73 0.63 +0.7
67,420 - HP15_p187g73 0.63 +2.2
67,422 - HP15_p187g73 0.63 +0.0
67,443 - HP15_p187g73 0.65 +0.8
67,483 - HP15_p187g73 0.70 +0.1
67,511 + HP15_p187g73 0.73 -1.4
67,523 + HP15_p187g73 0.75 +0.3
67,577 - HP15_p187g73 0.81 +0.5
67,587 + HP15_p187g73 0.82 -0.3
67,599 + HP15_p187g73 0.84 +1.0
67,600 - HP15_p187g73 0.84 -1.3
67,618 - HP15_p187g73 0.86 -0.2
67,618 - HP15_p187g73 0.86 -1.1
67,627 + HP15_p187g73 0.87 +0.2
67,627 + HP15_p187g73 0.87 -0.2
67,635 - HP15_p187g73 0.88 -0.2
67,650 + +1.2
67,650 - +0.3
67,652 + -1.0
67,658 - -0.8
67,658 - +0.3
67,665 - -1.4
67,680 + -1.4
67,688 - +0.1
67,693 - +1.0
67,706 + +0.4
67,714 - +1.3
67,730 + +0.2
67,772 + -0.6
67,818 + -0.9
67,826 + -0.2
67,828 + +0.6
67,828 + +0.4
67,834 - +0.1
67,836 - +0.6
67,846 - +0.8
67,998 + HP15_p187g74 0.28 +0.9
67,998 + HP15_p187g74 0.28 -0.8
67,998 + HP15_p187g74 0.28 +0.2
67,998 + HP15_p187g74 0.28 -1.5
68,006 - HP15_p187g74 0.30 -0.7
68,006 - HP15_p187g74 0.30 +0.2
68,035 + HP15_p187g74 0.39 -0.1
68,043 - HP15_p187g74 0.41 -0.2
68,043 - HP15_p187g74 0.41 +1.3
68,045 - HP15_p187g74 0.42 -0.9
68,046 + HP15_p187g74 0.42 +0.6
68,083 + HP15_p187g74 0.53 -0.4
68,088 - HP15_p187g74 0.55 -0.4
68,088 - HP15_p187g74 0.55 -2.1
68,128 - HP15_p187g74 0.67 -0.5
68,138 + HP15_p187g74 0.70 +1.0
68,141 - HP15_p187g74 0.71 +0.6
68,153 + HP15_p187g74 0.74 +1.4
68,161 - HP15_p187g74 0.77 +0.3
68,174 + HP15_p187g74 0.80 +0.6
68,221 + +0.8
68,221 + -0.5
68,227 - +1.1
68,247 - +0.4
68,312 + -0.7
68,374 + -1.3
68,382 - -3.0
68,390 - +0.9
68,404 + -0.7
68,412 - +0.6
68,412 - +1.3
68,416 + -0.4
68,427 - +0.5
68,427 - -1.9
68,456 - -0.2
68,461 - +0.1
68,529 - -0.1
68,537 + -1.0
68,539 - +1.0
68,550 - -0.6
68,600 + -0.4
68,632 + HP15_p187g75 0.11 +1.3
68,653 + HP15_p187g75 0.12 +0.2
68,653 + HP15_p187g75 0.12 +0.3
68,653 + HP15_p187g75 0.12 -0.3
68,653 + HP15_p187g75 0.12 -1.0
68,653 + HP15_p187g75 0.12 +0.5
68,653 + HP15_p187g75 0.12 +1.5
68,661 - HP15_p187g75 0.13 +1.0
68,661 - HP15_p187g75 0.13 -0.4
68,661 - HP15_p187g75 0.13 -0.6
68,661 - HP15_p187g75 0.13 +0.9
68,661 - HP15_p187g75 0.13 -1.9
68,661 - HP15_p187g75 0.13 +0.9
68,661 - HP15_p187g75 0.13 +0.3
68,667 + HP15_p187g75 0.13 +1.4
68,681 - HP15_p187g75 0.14 -0.5
68,690 + HP15_p187g75 0.15 -0.3
68,717 - HP15_p187g75 0.17 +1.0
68,719 - HP15_p187g75 0.17 +0.9
68,720 + HP15_p187g75 0.17 -1.0
68,720 + HP15_p187g75 0.17 -0.9
68,728 - HP15_p187g75 0.18 +1.6
68,728 - HP15_p187g75 0.18 -0.9
68,730 + HP15_p187g75 0.18 +1.6
68,731 + HP15_p187g75 0.18 -0.9
68,737 - HP15_p187g75 0.18 +1.3
68,790 - HP15_p187g75 0.22 +1.3
68,806 - HP15_p187g75 0.24 -0.5
68,808 - HP15_p187g75 0.24 -0.4
68,835 + HP15_p187g75 0.26 -0.3
68,856 - HP15_p187g75 0.27 +0.8
68,882 - HP15_p187g75 0.29 +0.3
68,910 + HP15_p187g75 0.31 -0.5
68,934 + HP15_p187g75 0.33 -0.8
68,942 - HP15_p187g75 0.34 +1.6
68,944 + HP15_p187g75 0.34 +1.2
68,947 - HP15_p187g75 0.34 +2.0
68,947 - HP15_p187g75 0.34 +1.0
68,959 + HP15_p187g75 0.35 -0.4
69,024 - HP15_p187g75 0.40 +0.8
69,024 - HP15_p187g75 0.40 +0.3
69,024 - HP15_p187g75 0.40 -0.6
69,024 - HP15_p187g75 0.40 +0.0
69,043 + HP15_p187g75 0.41 +0.9
69,049 + HP15_p187g75 0.42 +0.9
69,093 - HP15_p187g75 0.45 +1.2
69,196 + HP15_p187g75 0.53 -0.9
69,196 + HP15_p187g75 0.53 +1.6
69,204 - HP15_p187g75 0.53 -0.2
69,219 - HP15_p187g75 0.54 +1.0
69,226 - HP15_p187g75 0.55 -0.4

Or see this region's nucleotide sequence