Experiment: Myristic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc03166 and SMc03167 are separated by 169 nucleotides SMc03167 and SMc03168 are separated by 28 nucleotides
SMc03166: SMc03166 - hypothetical protein, at 3,125,900 to 3,126,985
SMc03166
SMc03167: SMc03167 - multidrug efflux system protein, at 3,127,155 to 3,128,744
SMc03167
SMc03168: SMc03168 - multidrug efflux system protein, at 3,128,773 to 3,129,921
SMc03168
Position (kb)
3127
3128
3129 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 3126.243 kb on + strand, within SMc03166 at 3126.243 kb on + strand, within SMc03166 at 3126.243 kb on + strand, within SMc03166 at 3126.393 kb on + strand, within SMc03166 at 3126.393 kb on + strand, within SMc03166 at 3126.393 kb on + strand, within SMc03166 at 3126.394 kb on - strand, within SMc03166 at 3126.442 kb on - strand at 3126.464 kb on - strand, within SMc03166 at 3126.474 kb on + strand, within SMc03166 at 3126.555 kb on + strand, within SMc03166 at 3126.617 kb on + strand, within SMc03166 at 3127.002 kb on - strand at 3127.002 kb on - strand at 3127.075 kb on - strand at 3127.245 kb on + strand at 3127.245 kb on + strand at 3127.245 kb on + strand at 3127.245 kb on + strand at 3127.420 kb on + strand, within SMc03167 at 3127.448 kb on + strand, within SMc03167 at 3127.449 kb on - strand, within SMc03167 at 3127.449 kb on - strand, within SMc03167 at 3127.449 kb on - strand, within SMc03167 at 3127.502 kb on - strand, within SMc03167 at 3127.802 kb on - strand, within SMc03167 at 3127.837 kb on + strand at 3127.837 kb on + strand, within SMc03167 at 3127.837 kb on + strand, within SMc03167 at 3127.837 kb on + strand, within SMc03167 at 3127.837 kb on + strand, within SMc03167 at 3127.837 kb on + strand, within SMc03167 at 3127.838 kb on - strand, within SMc03167 at 3127.838 kb on - strand, within SMc03167 at 3127.838 kb on - strand, within SMc03167 at 3127.838 kb on - strand, within SMc03167 at 3127.838 kb on - strand, within SMc03167 at 3127.838 kb on - strand, within SMc03167 at 3127.838 kb on - strand, within SMc03167 at 3127.955 kb on - strand, within SMc03167 at 3127.955 kb on - strand, within SMc03167 at 3128.051 kb on - strand, within SMc03167 at 3128.684 kb on + strand at 3128.703 kb on + strand at 3128.704 kb on - strand at 3128.774 kb on + strand at 3129.017 kb on + strand, within SMc03168 at 3129.018 kb on - strand, within SMc03168 at 3129.094 kb on - strand, within SMc03168 at 3129.095 kb on + strand, within SMc03168 at 3129.095 kb on + strand, within SMc03168 at 3129.096 kb on - strand, within SMc03168 at 3129.202 kb on + strand, within SMc03168 at 3129.202 kb on + strand, within SMc03168 at 3129.203 kb on - strand, within SMc03168 at 3129.203 kb on - strand, within SMc03168 at 3129.322 kb on - strand, within SMc03168 at 3129.340 kb on + strand, within SMc03168 at 3129.341 kb on - strand, within SMc03168 at 3129.594 kb on - strand, within SMc03168 at 3129.671 kb on + strand, within SMc03168 at 3129.671 kb on + strand, within SMc03168 at 3129.672 kb on - strand, within SMc03168 at 3129.672 kb on - strand, within SMc03168 at 3129.672 kb on - strand, within SMc03168 at 3129.712 kb on + strand, within SMc03168 at 3129.712 kb on + strand, within SMc03168 at 3129.712 kb on + strand, within SMc03168 at 3129.712 kb on + strand, within SMc03168 at 3129.712 kb on + strand, within SMc03168 at 3129.712 kb on + strand, within SMc03168 at 3129.713 kb on - strand, within SMc03168 at 3129.713 kb on - strand, within SMc03168 at 3129.713 kb on - strand, within SMc03168 at 3129.713 kb on - strand, within SMc03168 at 3129.716 kb on + strand, within SMc03168 at 3129.716 kb on + strand, within SMc03168 at 3129.716 kb on + strand, within SMc03168 at 3129.717 kb on - strand, within SMc03168 at 3129.717 kb on - strand, within SMc03168 at 3129.717 kb on - strand, within SMc03168
Per-strain Table
Position Strand Gene LocusTag Fraction Myristic (C) remove 3,126,243 + SMc03166 0.32 -0.2 3,126,243 + SMc03166 0.32 -1.2 3,126,243 + SMc03166 0.32 -0.2 3,126,393 + SMc03166 0.45 +0.4 3,126,393 + SMc03166 0.45 +0.0 3,126,393 + SMc03166 0.45 -1.7 3,126,394 - SMc03166 0.45 -0.2 3,126,442 - -1.8 3,126,464 - SMc03166 0.52 -0.9 3,126,474 + SMc03166 0.53 +0.0 3,126,555 + SMc03166 0.60 -0.2 3,126,617 + SMc03166 0.66 -1.1 3,127,002 - -0.3 3,127,002 - +0.1 3,127,075 - -0.9 3,127,245 + -2.4 3,127,245 + -2.1 3,127,245 + -1.8 3,127,245 + -2.0 3,127,420 + SMc03167 0.17 -0.5 3,127,448 + SMc03167 0.18 +1.5 3,127,449 - SMc03167 0.18 -3.6 3,127,449 - SMc03167 0.18 -0.5 3,127,449 - SMc03167 0.18 +0.7 3,127,502 - SMc03167 0.22 -1.4 3,127,802 - SMc03167 0.41 -2.6 3,127,837 + -1.1 3,127,837 + SMc03167 0.43 -1.9 3,127,837 + SMc03167 0.43 -1.3 3,127,837 + SMc03167 0.43 -2.3 3,127,837 + SMc03167 0.43 -3.1 3,127,837 + SMc03167 0.43 -1.7 3,127,838 - SMc03167 0.43 -0.6 3,127,838 - SMc03167 0.43 -1.4 3,127,838 - SMc03167 0.43 -1.6 3,127,838 - SMc03167 0.43 -1.8 3,127,838 - SMc03167 0.43 -3.4 3,127,838 - SMc03167 0.43 -1.6 3,127,838 - SMc03167 0.43 -1.2 3,127,955 - SMc03167 0.50 -2.8 3,127,955 - SMc03167 0.50 -1.1 3,128,051 - SMc03167 0.56 -2.9 3,128,684 + -4.6 3,128,703 + -2.6 3,128,704 - -1.9 3,128,774 + -1.5 3,129,017 + SMc03168 0.21 -2.6 3,129,018 - SMc03168 0.21 -3.8 3,129,094 - SMc03168 0.28 -0.5 3,129,095 + SMc03168 0.28 -2.4 3,129,095 + SMc03168 0.28 -2.9 3,129,096 - SMc03168 0.28 -2.0 3,129,202 + SMc03168 0.37 -3.1 3,129,202 + SMc03168 0.37 -3.4 3,129,203 - SMc03168 0.37 -2.0 3,129,203 - SMc03168 0.37 -1.5 3,129,322 - SMc03168 0.48 -1.9 3,129,340 + SMc03168 0.49 +0.2 3,129,341 - SMc03168 0.49 -2.1 3,129,594 - SMc03168 0.71 -2.2 3,129,671 + SMc03168 0.78 -3.0 3,129,671 + SMc03168 0.78 -1.1 3,129,672 - SMc03168 0.78 -1.1 3,129,672 - SMc03168 0.78 -2.4 3,129,672 - SMc03168 0.78 -1.6 3,129,712 + SMc03168 0.82 -4.6 3,129,712 + SMc03168 0.82 -2.2 3,129,712 + SMc03168 0.82 -1.8 3,129,712 + SMc03168 0.82 -2.1 3,129,712 + SMc03168 0.82 -3.2 3,129,712 + SMc03168 0.82 -0.9 3,129,713 - SMc03168 0.82 -4.4 3,129,713 - SMc03168 0.82 -1.5 3,129,713 - SMc03168 0.82 +1.5 3,129,713 - SMc03168 0.82 -2.1 3,129,716 + SMc03168 0.82 -2.8 3,129,716 + SMc03168 0.82 -2.5 3,129,716 + SMc03168 0.82 -1.6 3,129,717 - SMc03168 0.82 -2.1 3,129,717 - SMc03168 0.82 -1.4 3,129,717 - SMc03168 0.82 -2.8
Or see this region's nucleotide sequence