Strain Fitness in Sinorhizobium meliloti 1021 around SMc00574

Experiment: Myristic (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSMc00572 and SMc00573 are separated by 336 nucleotidesSMc00573 and SMc00574 are separated by 305 nucleotidesSMc00574 and SMc00575 are separated by 324 nucleotides SMc00572: SMc00572 - 3-ketoacyl-ACP reductase, at 1,241,639 to 1,242,376 SMc00572 SMc00573: SMc00573 - acyl carrier protein, at 1,242,713 to 1,242,949 SMc00573 SMc00574: SMc00574 - 3-oxoacyl-ACP synthase, at 1,243,255 to 1,244,520 SMc00574 SMc00575: SMc00575 - hypothetical protein, at 1,244,845 to 1,246,044 SMc00575 Position (kb) 1243 1244 1245Strain fitness (log2 ratio) -2 -1 0 1 2at 1243.074 kb on + strandat 1243.083 kb on + strandat 1243.083 kb on + strandat 1244.506 kb on + strandat 1244.506 kb on + strandat 1244.559 kb on + strandat 1244.559 kb on + strandat 1244.559 kb on + strandat 1244.628 kb on + strandat 1244.628 kb on + strandat 1244.711 kb on + strandat 1244.761 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Myristic (C)
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1,243,074 + +1.0
1,243,083 + +0.3
1,243,083 + -0.8
1,244,506 + -0.3
1,244,506 + +0.5
1,244,559 + +0.2
1,244,559 + +1.2
1,244,559 + +0.5
1,244,628 + +2.2
1,244,628 + -0.1
1,244,711 + +1.6
1,244,761 + -1.8

Or see this region's nucleotide sequence