Strain Fitness in Sinorhizobium meliloti 1021 around SMc00572

Experiment: Myristic (C)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntSMc00571 and SMc00572 are separated by 24 nucleotidesSMc00572 and SMc00573 are separated by 336 nucleotidesSMc00573 and SMc00574 are separated by 305 nucleotides SMc00571: SMc00571 - ACP S-malonyltransferase, at 1,240,670 to 1,241,614 SMc00571 SMc00572: SMc00572 - 3-ketoacyl-ACP reductase, at 1,241,639 to 1,242,376 SMc00572 SMc00573: SMc00573 - acyl carrier protein, at 1,242,713 to 1,242,949 SMc00573 SMc00574: SMc00574 - 3-oxoacyl-ACP synthase, at 1,243,255 to 1,244,520 SMc00574 Position (kb) 1241 1242 1243Strain fitness (log2 ratio) -1 0 1at 1241.621 kb on + strandat 1241.624 kb on + strandat 1241.624 kb on + strandat 1241.624 kb on + strandat 1241.626 kb on + strandat 1241.626 kb on + strandat 1243.074 kb on + strandat 1243.083 kb on + strandat 1243.083 kb on + strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction Myristic (C)
remove
1,241,621 + -0.3
1,241,624 + -0.5
1,241,624 + -0.5
1,241,624 + -0.8
1,241,626 + -0.3
1,241,626 + -0.2
1,243,074 + +1.0
1,243,083 + +0.3
1,243,083 + -0.8

Or see this region's nucleotide sequence