Experiment: Myristic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa2163 and SMa2165 are separated by 125 nucleotides
SMa2163: SMa2163 - AraC family transcriptional regulator, at 1,218,608 to 1,219,489
SMa2163
SMa2165: SMa2165 - short chain, at 1,219,615 to 1,220,355
SMa2165
Position (kb)
1219
1220
1221 Strain fitness (log2 ratio)
-2
-1
0
1 at 1218.667 kb on + strand at 1218.668 kb on - strand at 1218.716 kb on - strand, within SMa2163 at 1218.761 kb on - strand, within SMa2163 at 1218.771 kb on + strand, within SMa2163 at 1218.771 kb on + strand, within SMa2163 at 1218.822 kb on - strand, within SMa2163 at 1218.822 kb on - strand, within SMa2163 at 1219.051 kb on + strand, within SMa2163 at 1219.052 kb on - strand, within SMa2163 at 1219.052 kb on - strand, within SMa2163 at 1219.052 kb on - strand, within SMa2163 at 1219.056 kb on - strand, within SMa2163 at 1219.056 kb on - strand, within SMa2163 at 1219.088 kb on + strand, within SMa2163 at 1219.089 kb on - strand, within SMa2163 at 1219.140 kb on - strand, within SMa2163 at 1219.173 kb on - strand, within SMa2163 at 1219.173 kb on - strand, within SMa2163 at 1219.173 kb on - strand, within SMa2163 at 1219.221 kb on + strand, within SMa2163 at 1219.221 kb on + strand, within SMa2163 at 1219.237 kb on + strand, within SMa2163 at 1219.238 kb on - strand, within SMa2163 at 1219.853 kb on + strand, within SMa2165 at 1219.957 kb on - strand, within SMa2165 at 1219.957 kb on - strand, within SMa2165 at 1219.985 kb on + strand, within SMa2165 at 1219.985 kb on + strand, within SMa2165 at 1219.989 kb on - strand, within SMa2165 at 1219.989 kb on - strand, within SMa2165 at 1220.032 kb on + strand, within SMa2165 at 1220.033 kb on - strand, within SMa2165 at 1220.033 kb on - strand, within SMa2165 at 1220.033 kb on - strand, within SMa2165 at 1220.219 kb on + strand, within SMa2165 at 1220.219 kb on + strand, within SMa2165 at 1220.220 kb on - strand, within SMa2165 at 1220.323 kb on + strand at 1220.323 kb on + strand at 1220.324 kb on - strand at 1220.543 kb on - strand at 1220.572 kb on - strand at 1220.651 kb on - strand at 1220.662 kb on + strand at 1220.663 kb on - strand at 1220.682 kb on - strand at 1220.682 kb on - strand at 1220.706 kb on + strand at 1220.763 kb on + strand at 1220.808 kb on + strand at 1220.867 kb on + strand at 1220.961 kb on + strand at 1220.962 kb on - strand at 1220.962 kb on - strand at 1220.962 kb on - strand at 1220.962 kb on - strand at 1221.090 kb on + strand at 1221.091 kb on - strand at 1221.155 kb on + strand at 1221.155 kb on + strand at 1221.155 kb on + strand at 1221.163 kb on + strand at 1221.164 kb on - strand at 1221.237 kb on + strand at 1221.296 kb on - strand at 1221.300 kb on + strand at 1221.300 kb on + strand at 1221.321 kb on + strand at 1221.321 kb on + strand at 1221.322 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Myristic (C) remove 1,218,667 + +0.2 1,218,668 - +0.5 1,218,716 - SMa2163 0.12 -0.1 1,218,761 - SMa2163 0.17 +0.1 1,218,771 + SMa2163 0.18 -0.3 1,218,771 + SMa2163 0.18 +1.1 1,218,822 - SMa2163 0.24 -1.8 1,218,822 - SMa2163 0.24 -0.3 1,219,051 + SMa2163 0.50 +0.2 1,219,052 - SMa2163 0.50 -0.4 1,219,052 - SMa2163 0.50 -1.0 1,219,052 - SMa2163 0.50 -0.7 1,219,056 - SMa2163 0.51 -1.3 1,219,056 - SMa2163 0.51 +0.2 1,219,088 + SMa2163 0.54 +0.5 1,219,089 - SMa2163 0.55 -1.0 1,219,140 - SMa2163 0.60 +0.3 1,219,173 - SMa2163 0.64 +0.2 1,219,173 - SMa2163 0.64 -0.4 1,219,173 - SMa2163 0.64 +1.0 1,219,221 + SMa2163 0.70 +0.8 1,219,221 + SMa2163 0.70 +0.2 1,219,237 + SMa2163 0.71 -1.8 1,219,238 - SMa2163 0.71 +1.3 1,219,853 + SMa2165 0.32 +0.1 1,219,957 - SMa2165 0.46 +0.8 1,219,957 - SMa2165 0.46 -0.1 1,219,985 + SMa2165 0.50 +0.8 1,219,985 + SMa2165 0.50 -0.3 1,219,989 - SMa2165 0.50 -0.1 1,219,989 - SMa2165 0.50 +0.0 1,220,032 + SMa2165 0.56 +0.2 1,220,033 - SMa2165 0.56 -0.0 1,220,033 - SMa2165 0.56 -0.5 1,220,033 - SMa2165 0.56 -0.3 1,220,219 + SMa2165 0.82 +0.5 1,220,219 + SMa2165 0.82 -0.6 1,220,220 - SMa2165 0.82 +0.4 1,220,323 + -0.2 1,220,323 + -0.3 1,220,324 - +0.2 1,220,543 - +0.2 1,220,572 - -0.3 1,220,651 - +0.3 1,220,662 + +0.8 1,220,663 - +0.0 1,220,682 - +0.1 1,220,682 - -1.1 1,220,706 + -0.5 1,220,763 + +0.8 1,220,808 + +0.6 1,220,867 + +0.8 1,220,961 + +0.9 1,220,962 - -0.7 1,220,962 - -0.1 1,220,962 - -0.3 1,220,962 - -0.7 1,221,090 + -0.2 1,221,091 - +0.1 1,221,155 + +0.1 1,221,155 + -0.4 1,221,155 + -0.3 1,221,163 + -0.6 1,221,164 - -0.3 1,221,237 + -0.2 1,221,296 - +0.5 1,221,300 + -0.0 1,221,300 + -0.3 1,221,321 + +0.0 1,221,321 + -0.0 1,221,322 - -0.2
Or see this region's nucleotide sequence