Experiment: Myristic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa1966 and SMa1967 are separated by 215 nucleotides SMa1967 and SMa1968 are separated by 194 nucleotides SMa1968 and SMa1969 are separated by 76 nucleotides
SMa1966: SMa1966 - LysR family transcriptional regulator, at 1,118,218 to 1,119,327
SMa1966
SMa1967: SMa1967 - short chain alcohol, at 1,119,543 to 1,119,881
SMa1967
SMa1968: SMa1968 - amidotransferase, at 1,120,076 to 1,120,768
SMa1968
SMa1969: SMa1969 - amidotransferase, at 1,120,845 to 1,121,684
SMa1969
Position (kb)
1119
1120 Strain fitness (log2 ratio)
-1
0
1
2 at 1118.648 kb on + strand, within SMa1966 at 1118.648 kb on + strand, within SMa1966 at 1118.648 kb on + strand, within SMa1966 at 1118.649 kb on - strand, within SMa1966 at 1118.846 kb on + strand, within SMa1966 at 1118.855 kb on + strand, within SMa1966 at 1118.855 kb on + strand, within SMa1966 at 1118.855 kb on + strand, within SMa1966 at 1119.132 kb on + strand, within SMa1966 at 1119.133 kb on - strand, within SMa1966 at 1119.133 kb on - strand, within SMa1966 at 1119.196 kb on + strand, within SMa1966 at 1119.196 kb on + strand, within SMa1966 at 1119.197 kb on - strand, within SMa1966 at 1119.197 kb on - strand, within SMa1966 at 1119.216 kb on + strand, within SMa1966 at 1119.217 kb on - strand at 1119.238 kb on - strand at 1119.248 kb on - strand at 1119.347 kb on + strand at 1119.347 kb on + strand at 1119.347 kb on + strand at 1119.347 kb on + strand at 1119.391 kb on + strand at 1119.408 kb on - strand at 1119.492 kb on + strand at 1119.565 kb on + strand at 1119.566 kb on - strand at 1119.605 kb on + strand, within SMa1967 at 1119.606 kb on - strand, within SMa1967 at 1119.726 kb on + strand, within SMa1967 at 1119.733 kb on - strand, within SMa1967 at 1119.765 kb on - strand, within SMa1967 at 1119.945 kb on + strand at 1119.945 kb on + strand at 1119.946 kb on - strand at 1119.948 kb on + strand at 1119.949 kb on - strand at 1119.949 kb on - strand at 1120.023 kb on + strand at 1120.154 kb on + strand, within SMa1968 at 1120.155 kb on - strand, within SMa1968 at 1120.166 kb on + strand, within SMa1968 at 1120.167 kb on - strand, within SMa1968 at 1120.403 kb on - strand, within SMa1968 at 1120.403 kb on - strand, within SMa1968 at 1120.403 kb on - strand, within SMa1968 at 1120.403 kb on - strand, within SMa1968 at 1120.454 kb on + strand, within SMa1968 at 1120.455 kb on - strand, within SMa1968
Per-strain Table
Position Strand Gene LocusTag Fraction Myristic (C) remove 1,118,648 + SMa1966 0.39 +0.0 1,118,648 + SMa1966 0.39 -0.4 1,118,648 + SMa1966 0.39 +1.2 1,118,649 - SMa1966 0.39 -0.4 1,118,846 + SMa1966 0.57 -0.6 1,118,855 + SMa1966 0.57 -0.9 1,118,855 + SMa1966 0.57 -0.0 1,118,855 + SMa1966 0.57 +0.1 1,119,132 + SMa1966 0.82 -0.7 1,119,133 - SMa1966 0.82 +0.2 1,119,133 - SMa1966 0.82 -0.1 1,119,196 + SMa1966 0.88 -0.2 1,119,196 + SMa1966 0.88 +0.2 1,119,197 - SMa1966 0.88 -0.5 1,119,197 - SMa1966 0.88 +0.0 1,119,216 + SMa1966 0.90 -0.5 1,119,217 - -1.0 1,119,238 - -0.8 1,119,248 - +0.1 1,119,347 + -0.1 1,119,347 + -0.7 1,119,347 + +0.8 1,119,347 + -0.3 1,119,391 + -0.1 1,119,408 - -0.1 1,119,492 + +0.6 1,119,565 + -1.5 1,119,566 - +0.6 1,119,605 + SMa1967 0.18 -0.4 1,119,606 - SMa1967 0.19 +0.2 1,119,726 + SMa1967 0.54 +0.8 1,119,733 - SMa1967 0.56 -0.4 1,119,765 - SMa1967 0.65 +0.1 1,119,945 + +1.2 1,119,945 + +0.5 1,119,946 - -0.1 1,119,948 + +2.0 1,119,949 - +0.4 1,119,949 - +0.0 1,120,023 + -1.0 1,120,154 + SMa1968 0.11 -0.7 1,120,155 - SMa1968 0.11 +0.1 1,120,166 + SMa1968 0.13 +1.3 1,120,167 - SMa1968 0.13 +0.1 1,120,403 - SMa1968 0.47 +1.2 1,120,403 - SMa1968 0.47 +0.7 1,120,403 - SMa1968 0.47 -0.8 1,120,403 - SMa1968 0.47 -0.4 1,120,454 + SMa1968 0.55 -1.1 1,120,455 - SMa1968 0.55 -0.3
Or see this region's nucleotide sequence