Experiment: Myristic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa0185 and SMa0187 are separated by 140 nucleotides SMa0187 and SMa0189 are separated by 425 nucleotides SMa0189 and SMa0190 are separated by 88 nucleotides
SMa0185: SMa0185 - transmembrane-transport protein, at 100,964 to 102,508
SMa0185
SMa0187: SMa0187 - short chain dehydrogenase, at 102,649 to 103,602
SMa0187
SMa0189: SMa0189 - hypothetical protein, at 104,028 to 104,471
SMa0189
SMa0190: SMa0190 - transcriptional regulator, at 104,560 to 105,189
SMa0190
Position (kb) 102
103
104 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 101.793 kb on + strand, within SMa0185 at 101.910 kb on + strand, within SMa0185 at 102.236 kb on + strand, within SMa0185 at 102.237 kb on - strand, within SMa0185 at 102.242 kb on - strand, within SMa0185 at 102.242 kb on - strand, within SMa0185 at 102.462 kb on + strand at 102.463 kb on - strand at 102.464 kb on + strand at 102.465 kb on - strand at 102.506 kb on + strand at 102.506 kb on + strand at 102.506 kb on + strand at 102.507 kb on - strand at 102.507 kb on - strand at 102.521 kb on + strand at 102.522 kb on - strand at 102.623 kb on + strand at 102.624 kb on - strand at 102.645 kb on - strand at 102.835 kb on + strand, within SMa0187 at 102.835 kb on + strand, within SMa0187 at 102.835 kb on + strand, within SMa0187 at 102.836 kb on - strand, within SMa0187 at 102.836 kb on - strand, within SMa0187 at 102.850 kb on + strand, within SMa0187 at 102.851 kb on - strand, within SMa0187 at 103.210 kb on + strand, within SMa0187 at 103.211 kb on - strand, within SMa0187 at 103.222 kb on + strand, within SMa0187 at 103.222 kb on + strand, within SMa0187 at 103.222 kb on + strand, within SMa0187 at 103.223 kb on - strand, within SMa0187 at 103.223 kb on - strand, within SMa0187 at 103.321 kb on + strand, within SMa0187 at 103.321 kb on + strand, within SMa0187 at 103.321 kb on + strand, within SMa0187 at 103.322 kb on - strand, within SMa0187 at 103.322 kb on - strand, within SMa0187 at 103.322 kb on - strand, within SMa0187 at 103.528 kb on + strand at 103.612 kb on + strand at 103.658 kb on + strand at 103.658 kb on + strand at 103.659 kb on - strand at 103.725 kb on + strand at 103.954 kb on + strand at 103.969 kb on - strand at 103.976 kb on + strand at 103.990 kb on + strand at 103.991 kb on - strand at 103.994 kb on - strand at 104.007 kb on + strand at 104.007 kb on + strand at 104.007 kb on + strand at 104.010 kb on + strand at 104.121 kb on + strand, within SMa0189 at 104.154 kb on + strand, within SMa0189 at 104.154 kb on + strand, within SMa0189 at 104.381 kb on + strand, within SMa0189 at 104.382 kb on - strand, within SMa0189 at 104.382 kb on - strand, within SMa0189 at 104.420 kb on - strand, within SMa0189 at 104.502 kb on + strand at 104.523 kb on + strand at 104.524 kb on - strand at 104.569 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Myristic (C) remove 101,793 + SMa0185 0.54 -0.3 101,910 + SMa0185 0.61 -0.9 102,236 + SMa0185 0.82 +0.1 102,237 - SMa0185 0.82 +0.4 102,242 - SMa0185 0.83 -0.2 102,242 - SMa0185 0.83 +0.1 102,462 + +0.2 102,463 - -0.1 102,464 + +0.5 102,465 - +0.0 102,506 + +0.2 102,506 + +1.0 102,506 + -0.2 102,507 - -0.1 102,507 - -1.0 102,521 + +1.9 102,522 - +0.5 102,623 + -0.0 102,624 - -0.0 102,645 - +0.4 102,835 + SMa0187 0.19 -1.8 102,835 + SMa0187 0.19 +1.2 102,835 + SMa0187 0.19 +0.2 102,836 - SMa0187 0.20 -0.2 102,836 - SMa0187 0.20 +0.6 102,850 + SMa0187 0.21 -1.6 102,851 - SMa0187 0.21 -0.7 103,210 + SMa0187 0.59 +0.7 103,211 - SMa0187 0.59 +0.0 103,222 + SMa0187 0.60 -0.8 103,222 + SMa0187 0.60 +0.8 103,222 + SMa0187 0.60 -0.0 103,223 - SMa0187 0.60 +0.3 103,223 - SMa0187 0.60 -0.9 103,321 + SMa0187 0.70 -0.1 103,321 + SMa0187 0.70 +0.6 103,321 + SMa0187 0.70 +0.1 103,322 - SMa0187 0.71 -0.8 103,322 - SMa0187 0.71 +0.9 103,322 - SMa0187 0.71 -1.0 103,528 + +0.5 103,612 + +0.1 103,658 + -0.1 103,658 + -0.9 103,659 - +1.1 103,725 + -0.8 103,954 + +0.2 103,969 - +0.5 103,976 + +0.3 103,990 + -1.6 103,991 - +0.1 103,994 - -0.0 104,007 + +0.3 104,007 + -1.0 104,007 + -3.7 104,010 + +0.8 104,121 + SMa0189 0.21 -0.0 104,154 + SMa0189 0.28 -0.4 104,154 + SMa0189 0.28 +0.2 104,381 + SMa0189 0.80 -0.4 104,382 - SMa0189 0.80 +0.4 104,382 - SMa0189 0.80 -0.1 104,420 - SMa0189 0.88 +0.0 104,502 + -0.5 104,523 + -0.1 104,524 - -0.6 104,569 - -0.1
Or see this region's nucleotide sequence