Experiment: Myristic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21538 and SM_b21539 overlap by 4 nucleotides SM_b21539 and SM_b21671 are separated by 6 nucleotides SM_b21671 and SM_b21540 are separated by 222 nucleotides
SM_b21538: SM_b21538 - phosphonoacetate hydrolase, at 1,067,004 to 1,068,278
_b21538
SM_b21539: SM_b21539 - aldehyde dehydrogenase, at 1,068,275 to 1,069,732
_b21539
SM_b21671: SM_b21671 - hypothetical protein, at 1,069,739 to 1,070,227
_b21671
SM_b21540: SM_b21540 - iron uptake ABC transporter substrate-binding protein precursor, at 1,070,450 to 1,071,472
_b21540
Position (kb)
1068
1069
1070 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1067.355 kb on + strand, within SM_b21538 at 1067.356 kb on - strand, within SM_b21538 at 1067.545 kb on - strand, within SM_b21538 at 1067.619 kb on + strand, within SM_b21538 at 1067.620 kb on - strand, within SM_b21538 at 1067.620 kb on - strand, within SM_b21538 at 1067.620 kb on - strand, within SM_b21538 at 1067.637 kb on + strand, within SM_b21538 at 1067.637 kb on + strand, within SM_b21538 at 1067.637 kb on + strand, within SM_b21538 at 1067.652 kb on + strand, within SM_b21538 at 1067.653 kb on - strand, within SM_b21538 at 1067.653 kb on - strand, within SM_b21538 at 1067.653 kb on - strand, within SM_b21538 at 1067.653 kb on - strand, within SM_b21538 at 1067.802 kb on + strand, within SM_b21538 at 1067.802 kb on + strand, within SM_b21538 at 1067.803 kb on - strand, within SM_b21538 at 1067.803 kb on - strand, within SM_b21538 at 1067.874 kb on + strand, within SM_b21538 at 1067.874 kb on + strand, within SM_b21538 at 1067.874 kb on + strand, within SM_b21538 at 1067.875 kb on - strand, within SM_b21538 at 1067.875 kb on - strand, within SM_b21538 at 1067.875 kb on - strand, within SM_b21538 at 1067.875 kb on - strand, within SM_b21538 at 1067.875 kb on - strand, within SM_b21538 at 1067.916 kb on + strand, within SM_b21538 at 1068.325 kb on - strand at 1068.358 kb on - strand at 1068.452 kb on + strand, within SM_b21539 at 1068.453 kb on - strand, within SM_b21539 at 1068.584 kb on + strand at 1068.584 kb on + strand, within SM_b21539 at 1068.613 kb on + strand, within SM_b21539 at 1068.613 kb on + strand, within SM_b21539 at 1068.867 kb on - strand, within SM_b21539 at 1069.542 kb on - strand, within SM_b21539 at 1069.560 kb on - strand, within SM_b21539 at 1069.560 kb on - strand, within SM_b21539 at 1069.662 kb on - strand at 1069.750 kb on + strand at 1069.753 kb on + strand at 1069.753 kb on + strand at 1069.754 kb on - strand at 1069.754 kb on - strand at 1069.769 kb on + strand at 1069.769 kb on + strand at 1070.008 kb on - strand, within SM_b21671 at 1070.023 kb on - strand, within SM_b21671 at 1070.094 kb on + strand, within SM_b21671 at 1070.216 kb on + strand at 1070.216 kb on + strand at 1070.216 kb on + strand at 1070.216 kb on + strand at 1070.217 kb on - strand at 1070.217 kb on - strand at 1070.217 kb on - strand at 1070.217 kb on - strand at 1070.217 kb on - strand at 1070.217 kb on - strand at 1070.218 kb on + strand at 1070.218 kb on + strand at 1070.219 kb on - strand at 1070.219 kb on - strand at 1070.225 kb on + strand at 1070.234 kb on - strand at 1070.236 kb on + strand at 1070.446 kb on + strand at 1070.447 kb on - strand at 1070.447 kb on - strand at 1070.538 kb on - strand at 1070.538 kb on - strand at 1070.570 kb on + strand, within SM_b21540 at 1070.571 kb on - strand, within SM_b21540
Per-strain Table
Position Strand Gene LocusTag Fraction Myristic (C) remove 1,067,355 + SM_b21538 0.28 -0.0 1,067,356 - SM_b21538 0.28 -0.0 1,067,545 - SM_b21538 0.42 +0.5 1,067,619 + SM_b21538 0.48 +0.2 1,067,620 - SM_b21538 0.48 -0.6 1,067,620 - SM_b21538 0.48 +0.2 1,067,620 - SM_b21538 0.48 -0.4 1,067,637 + SM_b21538 0.50 +0.1 1,067,637 + SM_b21538 0.50 -0.1 1,067,637 + SM_b21538 0.50 -0.6 1,067,652 + SM_b21538 0.51 -0.5 1,067,653 - SM_b21538 0.51 +0.4 1,067,653 - SM_b21538 0.51 -0.5 1,067,653 - SM_b21538 0.51 +0.7 1,067,653 - SM_b21538 0.51 -0.1 1,067,802 + SM_b21538 0.63 -0.6 1,067,802 + SM_b21538 0.63 -0.6 1,067,803 - SM_b21538 0.63 -0.5 1,067,803 - SM_b21538 0.63 -0.3 1,067,874 + SM_b21538 0.68 -0.2 1,067,874 + SM_b21538 0.68 -0.4 1,067,874 + SM_b21538 0.68 +0.6 1,067,875 - SM_b21538 0.68 -0.6 1,067,875 - SM_b21538 0.68 +0.3 1,067,875 - SM_b21538 0.68 +0.4 1,067,875 - SM_b21538 0.68 -1.1 1,067,875 - SM_b21538 0.68 -0.3 1,067,916 + SM_b21538 0.72 -1.4 1,068,325 - +0.2 1,068,358 - +1.0 1,068,452 + SM_b21539 0.12 -0.2 1,068,453 - SM_b21539 0.12 -0.6 1,068,584 + +0.8 1,068,584 + SM_b21539 0.21 -0.5 1,068,613 + SM_b21539 0.23 -0.2 1,068,613 + SM_b21539 0.23 +0.4 1,068,867 - SM_b21539 0.41 -0.1 1,069,542 - SM_b21539 0.87 -1.8 1,069,560 - SM_b21539 0.88 -0.5 1,069,560 - SM_b21539 0.88 -0.7 1,069,662 - +0.7 1,069,750 + +0.7 1,069,753 + +0.1 1,069,753 + +0.0 1,069,754 - +0.3 1,069,754 - +0.2 1,069,769 + -0.3 1,069,769 + +2.2 1,070,008 - SM_b21671 0.55 -0.5 1,070,023 - SM_b21671 0.58 -0.0 1,070,094 + SM_b21671 0.73 -0.1 1,070,216 + -1.4 1,070,216 + +1.0 1,070,216 + -0.9 1,070,216 + -0.3 1,070,217 - +0.0 1,070,217 - +0.2 1,070,217 - -0.1 1,070,217 - -0.8 1,070,217 - +0.9 1,070,217 - -0.5 1,070,218 + +0.7 1,070,218 + -0.3 1,070,219 - +0.1 1,070,219 - -1.1 1,070,225 + +0.2 1,070,234 - +0.2 1,070,236 + +0.7 1,070,446 + -0.1 1,070,447 - -0.0 1,070,447 - +0.2 1,070,538 - +0.1 1,070,538 - +0.8 1,070,570 + SM_b21540 0.12 +0.0 1,070,571 - SM_b21540 0.12 +0.2
Or see this region's nucleotide sequence