Experiment: Myristic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20870 and SM_b20871 are separated by 94 nucleotides SM_b20871 and SM_b20872 are separated by 138 nucleotides
SM_b20870: SM_b20870 - LysR family transcriptional regulator, at 1,277,200 to 1,278,096
_b20870
SM_b20871: SM_b20871 - short-chain dehydrogenase, at 1,278,191 to 1,278,940
_b20871
SM_b20872: SM_b20872 - transthyretin-like protein, at 1,279,079 to 1,279,468
_b20872
Position (kb)
1278
1279 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1277.206 kb on - strand at 1277.295 kb on + strand, within SM_b20870 at 1277.295 kb on + strand, within SM_b20870 at 1277.295 kb on + strand, within SM_b20870 at 1277.296 kb on - strand, within SM_b20870 at 1277.296 kb on - strand, within SM_b20870 at 1277.296 kb on - strand, within SM_b20870 at 1277.385 kb on - strand, within SM_b20870 at 1277.385 kb on - strand, within SM_b20870 at 1277.458 kb on + strand, within SM_b20870 at 1277.459 kb on - strand, within SM_b20870 at 1277.497 kb on + strand, within SM_b20870 at 1277.497 kb on + strand, within SM_b20870 at 1277.606 kb on - strand, within SM_b20870 at 1277.606 kb on - strand, within SM_b20870 at 1277.628 kb on + strand, within SM_b20870 at 1277.628 kb on + strand, within SM_b20870 at 1277.629 kb on - strand, within SM_b20870 at 1277.629 kb on - strand, within SM_b20870 at 1277.631 kb on - strand, within SM_b20870 at 1277.631 kb on - strand, within SM_b20870 at 1277.631 kb on - strand, within SM_b20870 at 1277.672 kb on + strand, within SM_b20870 at 1277.672 kb on + strand, within SM_b20870 at 1277.673 kb on - strand, within SM_b20870 at 1277.673 kb on - strand, within SM_b20870 at 1277.673 kb on - strand, within SM_b20870 at 1277.721 kb on + strand, within SM_b20870 at 1277.721 kb on + strand, within SM_b20870 at 1277.721 kb on + strand, within SM_b20870 at 1277.722 kb on - strand, within SM_b20870 at 1277.773 kb on + strand, within SM_b20870 at 1278.137 kb on + strand at 1278.137 kb on + strand at 1278.137 kb on + strand at 1278.137 kb on + strand at 1278.137 kb on + strand at 1278.137 kb on + strand at 1278.137 kb on + strand at 1278.160 kb on + strand at 1278.161 kb on - strand at 1278.164 kb on + strand at 1278.165 kb on - strand at 1278.185 kb on + strand at 1278.186 kb on - strand at 1278.186 kb on - strand at 1278.235 kb on + strand at 1278.440 kb on + strand, within SM_b20871 at 1278.440 kb on + strand, within SM_b20871 at 1278.440 kb on + strand, within SM_b20871 at 1278.440 kb on + strand, within SM_b20871 at 1278.440 kb on + strand, within SM_b20871 at 1278.441 kb on - strand, within SM_b20871 at 1278.441 kb on - strand, within SM_b20871 at 1278.441 kb on - strand, within SM_b20871 at 1278.441 kb on - strand, within SM_b20871 at 1278.441 kb on - strand, within SM_b20871 at 1278.441 kb on - strand, within SM_b20871 at 1278.500 kb on + strand, within SM_b20871 at 1278.500 kb on + strand, within SM_b20871 at 1278.500 kb on + strand, within SM_b20871 at 1278.501 kb on - strand, within SM_b20871 at 1278.501 kb on - strand, within SM_b20871 at 1278.592 kb on + strand, within SM_b20871 at 1278.592 kb on + strand, within SM_b20871 at 1278.592 kb on + strand, within SM_b20871 at 1278.639 kb on - strand, within SM_b20871 at 1278.715 kb on - strand, within SM_b20871 at 1278.715 kb on - strand, within SM_b20871 at 1278.978 kb on + strand at 1278.979 kb on - strand at 1279.003 kb on - strand at 1279.006 kb on + strand at 1279.030 kb on + strand at 1279.030 kb on + strand at 1279.030 kb on + strand at 1279.031 kb on - strand at 1279.102 kb on - strand at 1279.134 kb on + strand, within SM_b20872 at 1279.134 kb on + strand, within SM_b20872 at 1279.135 kb on - strand, within SM_b20872 at 1279.135 kb on - strand, within SM_b20872 at 1279.219 kb on + strand, within SM_b20872 at 1279.224 kb on + strand, within SM_b20872 at 1279.224 kb on + strand, within SM_b20872 at 1279.252 kb on - strand, within SM_b20872 at 1279.315 kb on + strand, within SM_b20872 at 1279.315 kb on + strand, within SM_b20872 at 1279.316 kb on - strand, within SM_b20872 at 1279.443 kb on + strand at 1279.443 kb on + strand at 1279.443 kb on + strand at 1279.443 kb on + strand at 1279.443 kb on + strand at 1279.444 kb on - strand at 1279.444 kb on - strand at 1279.444 kb on - strand at 1279.481 kb on + strand at 1279.481 kb on + strand at 1279.481 kb on + strand at 1279.481 kb on + strand at 1279.481 kb on + strand at 1279.482 kb on - strand at 1279.615 kb on + strand at 1279.615 kb on + strand at 1279.618 kb on + strand at 1279.619 kb on - strand at 1279.710 kb on + strand at 1279.811 kb on + strand at 1279.811 kb on + strand at 1279.831 kb on + strand at 1279.833 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Myristic (C) remove 1,277,206 - -0.4 1,277,295 + SM_b20870 0.11 +0.6 1,277,295 + SM_b20870 0.11 -2.0 1,277,295 + SM_b20870 0.11 -0.4 1,277,296 - SM_b20870 0.11 -0.2 1,277,296 - SM_b20870 0.11 +0.1 1,277,296 - SM_b20870 0.11 -0.4 1,277,385 - SM_b20870 0.21 +0.2 1,277,385 - SM_b20870 0.21 +0.1 1,277,458 + SM_b20870 0.29 +0.7 1,277,459 - SM_b20870 0.29 -2.6 1,277,497 + SM_b20870 0.33 -0.4 1,277,497 + SM_b20870 0.33 -0.1 1,277,606 - SM_b20870 0.45 -0.6 1,277,606 - SM_b20870 0.45 -0.4 1,277,628 + SM_b20870 0.48 +0.5 1,277,628 + SM_b20870 0.48 +0.5 1,277,629 - SM_b20870 0.48 -1.1 1,277,629 - SM_b20870 0.48 +0.2 1,277,631 - SM_b20870 0.48 -1.0 1,277,631 - SM_b20870 0.48 -0.9 1,277,631 - SM_b20870 0.48 +0.6 1,277,672 + SM_b20870 0.53 -0.2 1,277,672 + SM_b20870 0.53 +0.0 1,277,673 - SM_b20870 0.53 +0.4 1,277,673 - SM_b20870 0.53 -0.2 1,277,673 - SM_b20870 0.53 -1.4 1,277,721 + SM_b20870 0.58 +0.2 1,277,721 + SM_b20870 0.58 +0.2 1,277,721 + SM_b20870 0.58 -0.5 1,277,722 - SM_b20870 0.58 +0.0 1,277,773 + SM_b20870 0.64 +0.0 1,278,137 + +0.3 1,278,137 + +0.1 1,278,137 + +0.1 1,278,137 + +0.2 1,278,137 + -1.4 1,278,137 + -0.4 1,278,137 + -0.2 1,278,160 + -0.4 1,278,161 - +0.2 1,278,164 + -0.6 1,278,165 - +1.4 1,278,185 + -0.3 1,278,186 - +1.7 1,278,186 - -0.3 1,278,235 + +0.2 1,278,440 + SM_b20871 0.33 -0.2 1,278,440 + SM_b20871 0.33 +0.3 1,278,440 + SM_b20871 0.33 -0.6 1,278,440 + SM_b20871 0.33 -0.7 1,278,440 + SM_b20871 0.33 +0.2 1,278,441 - SM_b20871 0.33 +0.6 1,278,441 - SM_b20871 0.33 -0.6 1,278,441 - SM_b20871 0.33 +0.7 1,278,441 - SM_b20871 0.33 -1.6 1,278,441 - SM_b20871 0.33 +0.4 1,278,441 - SM_b20871 0.33 +0.2 1,278,500 + SM_b20871 0.41 +1.3 1,278,500 + SM_b20871 0.41 -1.0 1,278,500 + SM_b20871 0.41 +0.4 1,278,501 - SM_b20871 0.41 -0.3 1,278,501 - SM_b20871 0.41 -0.1 1,278,592 + SM_b20871 0.53 +0.5 1,278,592 + SM_b20871 0.53 +1.8 1,278,592 + SM_b20871 0.53 +0.3 1,278,639 - SM_b20871 0.60 +0.1 1,278,715 - SM_b20871 0.70 -0.9 1,278,715 - SM_b20871 0.70 +0.1 1,278,978 + -0.2 1,278,979 - -0.1 1,279,003 - +0.9 1,279,006 + -0.3 1,279,030 + +0.5 1,279,030 + -0.3 1,279,030 + -0.9 1,279,031 - -0.2 1,279,102 - +0.7 1,279,134 + SM_b20872 0.14 +1.1 1,279,134 + SM_b20872 0.14 +0.6 1,279,135 - SM_b20872 0.14 +0.2 1,279,135 - SM_b20872 0.14 -0.5 1,279,219 + SM_b20872 0.36 -0.3 1,279,224 + SM_b20872 0.37 -0.1 1,279,224 + SM_b20872 0.37 -0.1 1,279,252 - SM_b20872 0.44 -1.3 1,279,315 + SM_b20872 0.61 -1.2 1,279,315 + SM_b20872 0.61 -0.7 1,279,316 - SM_b20872 0.61 +0.1 1,279,443 + -1.0 1,279,443 + +0.1 1,279,443 + +0.4 1,279,443 + +0.0 1,279,443 + -0.8 1,279,444 - -0.7 1,279,444 - -2.2 1,279,444 - +0.2 1,279,481 + -0.4 1,279,481 + +0.3 1,279,481 + -0.5 1,279,481 + +0.7 1,279,481 + -0.2 1,279,482 - -0.1 1,279,615 + +0.0 1,279,615 + -0.2 1,279,618 + +1.4 1,279,619 - -0.3 1,279,710 + -1.0 1,279,811 + -1.3 1,279,811 + +0.6 1,279,831 + -0.5 1,279,833 + -0.7
Or see this region's nucleotide sequence