Experiment: Myristic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20681 and SM_b20682 are separated by 169 nucleotides SM_b20682 and SM_b20683 are separated by 126 nucleotides
SM_b20681: SM_b20681 - glyoxylate carboligase, at 1,482,468 to 1,484,252
_b20681
SM_b20682: SM_b20682 - IclR family transcriptional regulator, at 1,484,422 to 1,485,243
_b20682
SM_b20683: SM_b20683 - LysR family transcriptional regulator, at 1,485,370 to 1,486,269
_b20683
Position (kb)
1484
1485
1486 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1483.703 kb on - strand, within SM_b20681 at 1483.721 kb on - strand, within SM_b20681 at 1483.990 kb on + strand, within SM_b20681 at 1484.034 kb on + strand, within SM_b20681 at 1484.035 kb on - strand, within SM_b20681 at 1484.072 kb on - strand, within SM_b20681 at 1484.116 kb on - strand at 1484.116 kb on - strand at 1484.775 kb on + strand, within SM_b20682 at 1484.784 kb on - strand, within SM_b20682 at 1484.784 kb on - strand, within SM_b20682 at 1484.964 kb on + strand, within SM_b20682 at 1485.098 kb on - strand, within SM_b20682 at 1485.262 kb on + strand at 1485.262 kb on + strand at 1485.262 kb on + strand at 1485.262 kb on + strand at 1485.263 kb on - strand at 1485.263 kb on - strand at 1485.291 kb on + strand at 1485.372 kb on - strand at 1485.467 kb on + strand, within SM_b20683 at 1485.468 kb on - strand, within SM_b20683 at 1485.468 kb on - strand, within SM_b20683 at 1485.594 kb on - strand, within SM_b20683 at 1485.618 kb on + strand, within SM_b20683 at 1485.619 kb on - strand, within SM_b20683 at 1485.622 kb on - strand, within SM_b20683 at 1485.625 kb on + strand, within SM_b20683 at 1485.626 kb on - strand, within SM_b20683 at 1485.659 kb on + strand, within SM_b20683 at 1485.985 kb on + strand, within SM_b20683 at 1485.986 kb on - strand, within SM_b20683 at 1485.986 kb on - strand, within SM_b20683 at 1486.001 kb on - strand, within SM_b20683
Per-strain Table
Position Strand Gene LocusTag Fraction Myristic (C) remove 1,483,703 - SM_b20681 0.69 -0.3 1,483,721 - SM_b20681 0.70 +0.3 1,483,990 + SM_b20681 0.85 -1.5 1,484,034 + SM_b20681 0.88 -0.4 1,484,035 - SM_b20681 0.88 +0.2 1,484,072 - SM_b20681 0.90 +0.1 1,484,116 - +0.1 1,484,116 - -0.8 1,484,775 + SM_b20682 0.43 -1.4 1,484,784 - SM_b20682 0.44 -0.8 1,484,784 - SM_b20682 0.44 -0.3 1,484,964 + SM_b20682 0.66 -2.9 1,485,098 - SM_b20682 0.82 -0.7 1,485,262 + -0.6 1,485,262 + -0.1 1,485,262 + -0.1 1,485,262 + +0.1 1,485,263 - +0.6 1,485,263 - +0.5 1,485,291 + +0.2 1,485,372 - -0.4 1,485,467 + SM_b20683 0.11 +1.0 1,485,468 - SM_b20683 0.11 +0.1 1,485,468 - SM_b20683 0.11 +0.2 1,485,594 - SM_b20683 0.25 -0.3 1,485,618 + SM_b20683 0.28 -0.9 1,485,619 - SM_b20683 0.28 +0.4 1,485,622 - SM_b20683 0.28 +0.5 1,485,625 + SM_b20683 0.28 -0.2 1,485,626 - SM_b20683 0.28 +0.3 1,485,659 + SM_b20683 0.32 +0.1 1,485,985 + SM_b20683 0.68 -0.4 1,485,986 - SM_b20683 0.68 -0.4 1,485,986 - SM_b20683 0.68 +0.6 1,486,001 - SM_b20683 0.70 -1.3
Or see this region's nucleotide sequence