Experiment: KB with dihydrojasmonic, methyl ester 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_2571 and Psyr_2572 are separated by 278 nucleotides Psyr_2572 and Psyr_2573 are separated by 34 nucleotides
Psyr_2571: Psyr_2571 - monosaccharide ABC transporter ATP-binding protein, CUT2 family, at 2,984,833 to 2,986,320
_2571
Psyr_2572: Psyr_2572 - ribose-5-phosphate isomerase, at 2,986,599 to 2,987,060
_2572
Psyr_2573: Psyr_2573 - transcriptional regulator, DeoR family, at 2,987,095 to 2,988,108
_2573
Position (kb)
2986
2987
2988 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2985.642 kb on + strand, within Psyr_2571 at 2985.643 kb on - strand, within Psyr_2571 at 2985.683 kb on + strand, within Psyr_2571 at 2985.725 kb on - strand, within Psyr_2571 at 2985.728 kb on + strand, within Psyr_2571 at 2985.728 kb on + strand, within Psyr_2571 at 2985.728 kb on + strand, within Psyr_2571 at 2985.728 kb on + strand, within Psyr_2571 at 2985.728 kb on + strand, within Psyr_2571 at 2985.728 kb on + strand, within Psyr_2571 at 2985.728 kb on + strand, within Psyr_2571 at 2985.728 kb on + strand, within Psyr_2571 at 2985.728 kb on + strand, within Psyr_2571 at 2985.728 kb on + strand, within Psyr_2571 at 2985.728 kb on + strand, within Psyr_2571 at 2985.728 kb on + strand, within Psyr_2571 at 2985.728 kb on + strand, within Psyr_2571 at 2985.728 kb on + strand, within Psyr_2571 at 2985.728 kb on + strand, within Psyr_2571 at 2985.729 kb on - strand, within Psyr_2571 at 2985.729 kb on - strand, within Psyr_2571 at 2985.729 kb on - strand, within Psyr_2571 at 2985.729 kb on - strand, within Psyr_2571 at 2985.729 kb on - strand, within Psyr_2571 at 2985.729 kb on - strand, within Psyr_2571 at 2985.874 kb on + strand, within Psyr_2571 at 2985.875 kb on - strand, within Psyr_2571 at 2985.875 kb on - strand, within Psyr_2571 at 2986.274 kb on + strand at 2986.275 kb on - strand at 2986.348 kb on - strand at 2986.348 kb on - strand at 2986.350 kb on + strand at 2986.351 kb on - strand at 2986.354 kb on + strand at 2986.354 kb on + strand at 2986.378 kb on + strand at 2986.421 kb on + strand at 2986.422 kb on - strand at 2986.422 kb on - strand at 2986.481 kb on + strand at 2986.816 kb on + strand, within Psyr_2572 at 2986.874 kb on + strand, within Psyr_2572 at 2986.878 kb on + strand, within Psyr_2572 at 2986.879 kb on - strand, within Psyr_2572 at 2987.059 kb on - strand at 2987.192 kb on - strand at 2987.300 kb on + strand, within Psyr_2573 at 2987.444 kb on - strand, within Psyr_2573 at 2987.590 kb on + strand, within Psyr_2573 at 2987.591 kb on - strand, within Psyr_2573 at 2987.694 kb on + strand, within Psyr_2573 at 2987.970 kb on - strand, within Psyr_2573
Per-strain Table
Position Strand Gene LocusTag Fraction KB with dihydrojasmonic, methyl ester 10 mM remove 2,985,642 + Psyr_2571 0.54 -0.5 2,985,643 - Psyr_2571 0.54 +0.2 2,985,683 + Psyr_2571 0.57 -0.1 2,985,725 - Psyr_2571 0.60 +1.5 2,985,728 + Psyr_2571 0.60 +2.5 2,985,728 + Psyr_2571 0.60 +0.1 2,985,728 + Psyr_2571 0.60 +0.0 2,985,728 + Psyr_2571 0.60 -0.8 2,985,728 + Psyr_2571 0.60 +0.5 2,985,728 + Psyr_2571 0.60 +0.2 2,985,728 + Psyr_2571 0.60 -0.5 2,985,728 + Psyr_2571 0.60 -2.5 2,985,728 + Psyr_2571 0.60 -1.0 2,985,728 + Psyr_2571 0.60 -1.7 2,985,728 + Psyr_2571 0.60 -1.8 2,985,728 + Psyr_2571 0.60 -1.3 2,985,728 + Psyr_2571 0.60 +1.2 2,985,728 + Psyr_2571 0.60 -0.3 2,985,728 + Psyr_2571 0.60 +0.5 2,985,729 - Psyr_2571 0.60 -0.6 2,985,729 - Psyr_2571 0.60 -0.0 2,985,729 - Psyr_2571 0.60 -1.6 2,985,729 - Psyr_2571 0.60 +0.8 2,985,729 - Psyr_2571 0.60 -0.6 2,985,729 - Psyr_2571 0.60 +2.5 2,985,874 + Psyr_2571 0.70 +0.2 2,985,875 - Psyr_2571 0.70 -0.7 2,985,875 - Psyr_2571 0.70 -0.7 2,986,274 + -1.0 2,986,275 - -1.2 2,986,348 - +0.8 2,986,348 - -0.2 2,986,350 + -0.2 2,986,351 - -1.1 2,986,354 + +0.5 2,986,354 + -0.4 2,986,378 + +0.5 2,986,421 + -0.8 2,986,422 - -0.5 2,986,422 - -0.4 2,986,481 + -0.0 2,986,816 + Psyr_2572 0.47 -2.0 2,986,874 + Psyr_2572 0.60 -0.1 2,986,878 + Psyr_2572 0.60 -1.0 2,986,879 - Psyr_2572 0.61 +1.2 2,987,059 - +0.4 2,987,192 - -0.5 2,987,300 + Psyr_2573 0.20 +1.2 2,987,444 - Psyr_2573 0.34 +0.8 2,987,590 + Psyr_2573 0.49 +0.9 2,987,591 - Psyr_2573 0.49 +0.3 2,987,694 + Psyr_2573 0.59 -1.4 2,987,970 - Psyr_2573 0.86 +0.6
Or see this region's nucleotide sequence