Experiment: KB with dihydrojasmonic, methyl ester 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_2551 and Psyr_2552 are separated by 12 nucleotides Psyr_2552 and Psyr_2553 are separated by 1 nucleotides
Psyr_2551: Psyr_2551 - acetylornithine aminotransferase apoenzyme, at 2,964,735 to 2,965,991
_2551
Psyr_2552: Psyr_2552 - cyclase/dehydrase, at 2,966,004 to 2,966,471
_2552
Psyr_2553: Psyr_2553 - Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases-related enzyme, at 2,966,473 to 2,967,582
_2553
Position (kb)
2966
2967 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2965.095 kb on + strand, within Psyr_2551 at 2965.096 kb on - strand, within Psyr_2551 at 2965.224 kb on + strand, within Psyr_2551 at 2965.224 kb on + strand, within Psyr_2551 at 2965.225 kb on - strand, within Psyr_2551 at 2965.561 kb on - strand, within Psyr_2551 at 2965.618 kb on - strand, within Psyr_2551 at 2965.815 kb on + strand, within Psyr_2551 at 2965.815 kb on + strand, within Psyr_2551 at 2965.816 kb on - strand, within Psyr_2551 at 2965.816 kb on - strand, within Psyr_2551 at 2965.816 kb on - strand, within Psyr_2551 at 2965.816 kb on - strand, within Psyr_2551 at 2965.816 kb on - strand, within Psyr_2551 at 2965.899 kb on + strand at 2965.900 kb on - strand at 2966.015 kb on - strand at 2966.015 kb on - strand at 2966.142 kb on + strand, within Psyr_2552 at 2966.143 kb on - strand, within Psyr_2552 at 2966.143 kb on - strand, within Psyr_2552 at 2966.153 kb on + strand, within Psyr_2552 at 2966.154 kb on - strand, within Psyr_2552 at 2966.154 kb on - strand, within Psyr_2552 at 2966.848 kb on + strand, within Psyr_2553 at 2966.848 kb on + strand, within Psyr_2553 at 2966.849 kb on - strand, within Psyr_2553 at 2966.849 kb on - strand, within Psyr_2553 at 2966.849 kb on - strand, within Psyr_2553 at 2966.899 kb on + strand, within Psyr_2553 at 2967.217 kb on + strand, within Psyr_2553 at 2967.363 kb on + strand, within Psyr_2553 at 2967.363 kb on + strand, within Psyr_2553
Per-strain Table
Position Strand Gene LocusTag Fraction KB with dihydrojasmonic, methyl ester 10 mM remove 2,965,095 + Psyr_2551 0.29 +0.4 2,965,096 - Psyr_2551 0.29 -0.8 2,965,224 + Psyr_2551 0.39 +0.5 2,965,224 + Psyr_2551 0.39 +0.3 2,965,225 - Psyr_2551 0.39 +1.2 2,965,561 - Psyr_2551 0.66 -2.2 2,965,618 - Psyr_2551 0.70 -1.4 2,965,815 + Psyr_2551 0.86 -2.3 2,965,815 + Psyr_2551 0.86 -3.0 2,965,816 - Psyr_2551 0.86 +1.2 2,965,816 - Psyr_2551 0.86 +0.1 2,965,816 - Psyr_2551 0.86 -0.1 2,965,816 - Psyr_2551 0.86 +1.6 2,965,816 - Psyr_2551 0.86 +0.4 2,965,899 + +1.5 2,965,900 - +0.2 2,966,015 - +1.7 2,966,015 - -0.0 2,966,142 + Psyr_2552 0.29 -0.4 2,966,143 - Psyr_2552 0.30 +0.1 2,966,143 - Psyr_2552 0.30 +0.5 2,966,153 + Psyr_2552 0.32 -0.5 2,966,154 - Psyr_2552 0.32 -2.9 2,966,154 - Psyr_2552 0.32 -2.5 2,966,848 + Psyr_2553 0.34 +0.3 2,966,848 + Psyr_2553 0.34 +2.4 2,966,849 - Psyr_2553 0.34 -1.9 2,966,849 - Psyr_2553 0.34 +0.5 2,966,849 - Psyr_2553 0.34 -0.3 2,966,899 + Psyr_2553 0.38 -0.4 2,967,217 + Psyr_2553 0.67 +0.6 2,967,363 + Psyr_2553 0.80 +0.2 2,967,363 + Psyr_2553 0.80 +2.2
Or see this region's nucleotide sequence