Experiment: KB with dihydrojasmonic, methyl ester 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_2513 and Psyr_2514 are separated by 6 nucleotides Psyr_2514 and Psyr_2515 are separated by 3 nucleotides Psyr_2515 and Psyr_2516 overlap by 4 nucleotides
Psyr_2513: Psyr_2513 - extracellular solute-binding protein, family 1, at 2,922,800 to 2,923,879
_2513
Psyr_2514: Psyr_2514 - ABC transporter, at 2,923,886 to 2,924,599
_2514
Psyr_2515: Psyr_2515 - Binding-protein-dependent transport systems inner membrane component, at 2,924,603 to 2,925,451
_2515
Psyr_2516: Psyr_2516 - ABC transporter, substrate-binding protein, aliphatic sulfonate, at 2,925,448 to 2,926,458
_2516
Position (kb)
2923
2924
2925 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 2922.887 kb on + strand at 2922.887 kb on + strand at 2922.887 kb on + strand at 2922.887 kb on + strand at 2922.887 kb on + strand at 2922.887 kb on + strand at 2922.887 kb on + strand at 2922.887 kb on + strand at 2922.887 kb on + strand at 2922.887 kb on + strand at 2922.888 kb on - strand at 2922.888 kb on - strand at 2922.888 kb on - strand at 2922.888 kb on - strand at 2922.889 kb on + strand at 2922.889 kb on + strand at 2922.889 kb on + strand at 2922.889 kb on + strand at 2922.889 kb on + strand at 2922.890 kb on - strand at 2922.890 kb on - strand at 2922.890 kb on - strand at 2922.890 kb on - strand at 2922.890 kb on - strand at 2922.890 kb on - strand at 2922.891 kb on + strand at 2922.891 kb on + strand at 2922.891 kb on + strand at 2922.892 kb on - strand at 2922.892 kb on - strand at 2922.945 kb on - strand, within Psyr_2513 at 2922.945 kb on - strand, within Psyr_2513 at 2923.166 kb on + strand, within Psyr_2513 at 2923.167 kb on - strand, within Psyr_2513 at 2923.302 kb on + strand, within Psyr_2513 at 2923.302 kb on + strand, within Psyr_2513 at 2923.303 kb on - strand, within Psyr_2513 at 2923.346 kb on + strand, within Psyr_2513 at 2923.346 kb on + strand, within Psyr_2513 at 2923.346 kb on + strand, within Psyr_2513 at 2923.347 kb on - strand, within Psyr_2513 at 2923.385 kb on + strand, within Psyr_2513 at 2923.424 kb on + strand, within Psyr_2513 at 2923.424 kb on + strand, within Psyr_2513 at 2923.451 kb on + strand, within Psyr_2513 at 2923.452 kb on - strand, within Psyr_2513 at 2923.562 kb on + strand, within Psyr_2513 at 2923.658 kb on + strand, within Psyr_2513 at 2923.659 kb on - strand, within Psyr_2513 at 2923.707 kb on - strand, within Psyr_2513 at 2923.707 kb on - strand, within Psyr_2513 at 2923.773 kb on - strand at 2923.985 kb on + strand, within Psyr_2514 at 2924.043 kb on + strand, within Psyr_2514 at 2924.043 kb on + strand, within Psyr_2514 at 2924.043 kb on + strand, within Psyr_2514 at 2924.044 kb on - strand, within Psyr_2514 at 2924.044 kb on - strand, within Psyr_2514 at 2924.044 kb on - strand, within Psyr_2514 at 2924.044 kb on - strand, within Psyr_2514 at 2924.314 kb on - strand, within Psyr_2514 at 2924.338 kb on + strand, within Psyr_2514 at 2924.414 kb on + strand, within Psyr_2514 at 2924.545 kb on + strand at 2924.576 kb on + strand at 2924.576 kb on + strand at 2924.577 kb on - strand at 2924.577 kb on - strand at 2924.577 kb on - strand at 2924.577 kb on - strand at 2924.601 kb on + strand at 2924.601 kb on + strand at 2924.601 kb on + strand at 2924.601 kb on + strand at 2924.601 kb on + strand at 2924.601 kb on + strand at 2924.602 kb on - strand at 2924.602 kb on - strand at 2924.602 kb on - strand at 2924.602 kb on - strand at 2924.602 kb on - strand at 2924.602 kb on - strand at 2924.602 kb on - strand at 2924.913 kb on + strand, within Psyr_2515 at 2924.913 kb on + strand, within Psyr_2515 at 2924.913 kb on + strand, within Psyr_2515 at 2924.913 kb on + strand, within Psyr_2515 at 2924.913 kb on + strand, within Psyr_2515 at 2924.913 kb on + strand, within Psyr_2515 at 2924.913 kb on + strand, within Psyr_2515 at 2924.914 kb on - strand, within Psyr_2515 at 2924.914 kb on - strand, within Psyr_2515 at 2924.914 kb on - strand, within Psyr_2515 at 2924.914 kb on - strand, within Psyr_2515 at 2924.914 kb on - strand, within Psyr_2515 at 2924.914 kb on - strand, within Psyr_2515 at 2924.914 kb on - strand, within Psyr_2515 at 2924.914 kb on - strand, within Psyr_2515 at 2924.977 kb on - strand, within Psyr_2515 at 2925.097 kb on + strand, within Psyr_2515 at 2925.097 kb on + strand, within Psyr_2515 at 2925.097 kb on + strand, within Psyr_2515 at 2925.098 kb on - strand, within Psyr_2515 at 2925.109 kb on - strand, within Psyr_2515 at 2925.282 kb on + strand, within Psyr_2515
Per-strain Table
Position Strand Gene LocusTag Fraction KB with dihydrojasmonic, methyl ester 10 mM remove 2,922,887 + -2.3 2,922,887 + +1.0 2,922,887 + -0.1 2,922,887 + +2.0 2,922,887 + +0.2 2,922,887 + +0.2 2,922,887 + -1.1 2,922,887 + -2.5 2,922,887 + -0.8 2,922,887 + +1.2 2,922,888 - +2.4 2,922,888 - -0.5 2,922,888 - -1.3 2,922,888 - -0.6 2,922,889 + -0.1 2,922,889 + +0.4 2,922,889 + -1.1 2,922,889 + +0.6 2,922,889 + -0.5 2,922,890 - -0.3 2,922,890 - -0.4 2,922,890 - -0.0 2,922,890 - -0.3 2,922,890 - -0.8 2,922,890 - -0.0 2,922,891 + -1.6 2,922,891 + -1.4 2,922,891 + -0.5 2,922,892 - +0.2 2,922,892 - +0.3 2,922,945 - Psyr_2513 0.13 -1.1 2,922,945 - Psyr_2513 0.13 -1.7 2,923,166 + Psyr_2513 0.34 -0.5 2,923,167 - Psyr_2513 0.34 -1.6 2,923,302 + Psyr_2513 0.46 -0.0 2,923,302 + Psyr_2513 0.46 -0.9 2,923,303 - Psyr_2513 0.47 +0.8 2,923,346 + Psyr_2513 0.51 +1.6 2,923,346 + Psyr_2513 0.51 +1.0 2,923,346 + Psyr_2513 0.51 +1.2 2,923,347 - Psyr_2513 0.51 +1.2 2,923,385 + Psyr_2513 0.54 +0.2 2,923,424 + Psyr_2513 0.58 -0.9 2,923,424 + Psyr_2513 0.58 +0.2 2,923,451 + Psyr_2513 0.60 -0.2 2,923,452 - Psyr_2513 0.60 +0.9 2,923,562 + Psyr_2513 0.71 +0.0 2,923,658 + Psyr_2513 0.79 +1.2 2,923,659 - Psyr_2513 0.80 +0.9 2,923,707 - Psyr_2513 0.84 +0.4 2,923,707 - Psyr_2513 0.84 -0.4 2,923,773 - -0.4 2,923,985 + Psyr_2514 0.14 -1.3 2,924,043 + Psyr_2514 0.22 -0.6 2,924,043 + Psyr_2514 0.22 +0.1 2,924,043 + Psyr_2514 0.22 +1.2 2,924,044 - Psyr_2514 0.22 +1.8 2,924,044 - Psyr_2514 0.22 -1.0 2,924,044 - Psyr_2514 0.22 -0.8 2,924,044 - Psyr_2514 0.22 -1.7 2,924,314 - Psyr_2514 0.60 -1.1 2,924,338 + Psyr_2514 0.63 -0.2 2,924,414 + Psyr_2514 0.74 -2.7 2,924,545 + +0.6 2,924,576 + -0.6 2,924,576 + +0.6 2,924,577 - +0.9 2,924,577 - +4.0 2,924,577 - +0.7 2,924,577 - +1.5 2,924,601 + -2.1 2,924,601 + -0.4 2,924,601 + +0.4 2,924,601 + +2.1 2,924,601 + +1.9 2,924,601 + +0.2 2,924,602 - +4.4 2,924,602 - -1.1 2,924,602 - +1.7 2,924,602 - +2.2 2,924,602 - -1.7 2,924,602 - +0.7 2,924,602 - +0.7 2,924,913 + Psyr_2515 0.37 +2.5 2,924,913 + Psyr_2515 0.37 -0.2 2,924,913 + Psyr_2515 0.37 -0.3 2,924,913 + Psyr_2515 0.37 -0.3 2,924,913 + Psyr_2515 0.37 +0.8 2,924,913 + Psyr_2515 0.37 -0.2 2,924,913 + Psyr_2515 0.37 -1.3 2,924,914 - Psyr_2515 0.37 +0.8 2,924,914 - Psyr_2515 0.37 -1.9 2,924,914 - Psyr_2515 0.37 -1.1 2,924,914 - Psyr_2515 0.37 -0.0 2,924,914 - Psyr_2515 0.37 +0.8 2,924,914 - Psyr_2515 0.37 -0.2 2,924,914 - Psyr_2515 0.37 -0.8 2,924,914 - Psyr_2515 0.37 -2.6 2,924,977 - Psyr_2515 0.44 +1.4 2,925,097 + Psyr_2515 0.58 -0.8 2,925,097 + Psyr_2515 0.58 -1.8 2,925,097 + Psyr_2515 0.58 -1.6 2,925,098 - Psyr_2515 0.58 +0.8 2,925,109 - Psyr_2515 0.60 -0.8 2,925,282 + Psyr_2515 0.80 +1.4
Or see this region's nucleotide sequence