Experiment: Formate/Acetate-Sulfite (60/30-40 mM) + 0.1% Yeast Extract
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0392 and ung are separated by 253 nucleotides ung and DVU0394 are separated by 239 nucleotides
DVU0392: DVU0392 - aromatic aminotransferase (TIGR), at 440,311 to 441,510
DVU0392
DVU0393: ung - uracil-DNA glycosylase (TIGR), at 441,764 to 442,501
ung
DVU0394: DVU0394 - radical SAM domain protein (TIGR), at 442,741 to 443,763
DVU0394
Position (kb) 441
442
443 Strain fitness (log2 ratio) -2
-1
0
1
2 at 440.851 kb on + strand, within DVU0392 at 440.851 kb on + strand, within DVU0392 at 440.859 kb on - strand, within DVU0392 at 440.859 kb on - strand, within DVU0392 at 440.913 kb on + strand, within DVU0392 at 440.959 kb on + strand, within DVU0392 at 440.967 kb on - strand, within DVU0392 at 441.097 kb on + strand, within DVU0392 at 441.098 kb on - strand, within DVU0392 at 441.117 kb on - strand, within DVU0392 at 441.117 kb on - strand, within DVU0392 at 441.148 kb on - strand, within DVU0392 at 441.210 kb on + strand, within DVU0392 at 441.210 kb on + strand, within DVU0392 at 441.218 kb on - strand, within DVU0392 at 441.218 kb on - strand, within DVU0392 at 441.260 kb on + strand, within DVU0392 at 441.287 kb on - strand, within DVU0392 at 441.305 kb on - strand, within DVU0392 at 441.332 kb on + strand, within DVU0392 at 441.332 kb on + strand, within DVU0392 at 441.430 kb on - strand at 441.456 kb on - strand at 441.456 kb on - strand at 441.456 kb on - strand at 441.510 kb on + strand at 441.547 kb on + strand at 441.551 kb on + strand at 441.559 kb on + strand at 441.608 kb on + strand at 441.615 kb on + strand at 441.623 kb on - strand at 441.877 kb on + strand, within ung at 441.898 kb on + strand, within ung at 441.903 kb on + strand, within ung at 441.941 kb on - strand, within ung at 441.955 kb on - strand, within ung at 441.985 kb on - strand, within ung at 441.985 kb on - strand, within ung at 442.073 kb on - strand, within ung at 442.159 kb on + strand, within ung at 442.164 kb on + strand, within ung at 442.202 kb on - strand, within ung at 442.229 kb on - strand, within ung at 442.238 kb on + strand, within ung at 442.245 kb on + strand, within ung at 442.285 kb on + strand, within ung at 442.313 kb on - strand, within ung at 442.364 kb on - strand, within ung at 442.378 kb on - strand, within ung at 442.394 kb on + strand, within ung at 442.401 kb on + strand, within ung at 442.453 kb on + strand at 442.547 kb on + strand at 442.629 kb on + strand at 442.629 kb on + strand at 442.631 kb on + strand at 442.631 kb on + strand at 442.637 kb on - strand at 442.723 kb on - strand at 442.725 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Formate/Acetate-Sulfite (60/30-40 mM) + 0.1% Yeast Extract remove 440,851 + DVU0392 0.45 -0.2 440,851 + DVU0392 0.45 +0.3 440,859 - DVU0392 0.46 +0.2 440,859 - DVU0392 0.46 +0.9 440,913 + DVU0392 0.50 -0.4 440,959 + DVU0392 0.54 +0.0 440,967 - DVU0392 0.55 -0.1 441,097 + DVU0392 0.66 -0.9 441,098 - DVU0392 0.66 +0.4 441,117 - DVU0392 0.67 +0.8 441,117 - DVU0392 0.67 +0.2 441,148 - DVU0392 0.70 -0.4 441,210 + DVU0392 0.75 -0.7 441,210 + DVU0392 0.75 +0.3 441,218 - DVU0392 0.76 +0.8 441,218 - DVU0392 0.76 +0.1 441,260 + DVU0392 0.79 -0.6 441,287 - DVU0392 0.81 +1.6 441,305 - DVU0392 0.83 -0.3 441,332 + DVU0392 0.85 -0.4 441,332 + DVU0392 0.85 -1.1 441,430 - -0.1 441,456 - -0.3 441,456 - -0.1 441,456 - -0.5 441,510 + +0.1 441,547 + -0.5 441,551 + -0.2 441,559 + +0.1 441,608 + -0.5 441,615 + -0.1 441,623 - -0.7 441,877 + ung DVU0393 0.15 -0.7 441,898 + ung DVU0393 0.18 +1.9 441,903 + ung DVU0393 0.19 +0.3 441,941 - ung DVU0393 0.24 -1.9 441,955 - ung DVU0393 0.26 +0.4 441,985 - ung DVU0393 0.30 -0.1 441,985 - ung DVU0393 0.30 -0.5 442,073 - ung DVU0393 0.42 -0.6 442,159 + ung DVU0393 0.54 -0.3 442,164 + ung DVU0393 0.54 -0.6 442,202 - ung DVU0393 0.59 -0.1 442,229 - ung DVU0393 0.63 -0.0 442,238 + ung DVU0393 0.64 +1.1 442,245 + ung DVU0393 0.65 +1.3 442,285 + ung DVU0393 0.71 +0.1 442,313 - ung DVU0393 0.74 +1.1 442,364 - ung DVU0393 0.81 -1.8 442,378 - ung DVU0393 0.83 +0.2 442,394 + ung DVU0393 0.85 -0.3 442,401 + ung DVU0393 0.86 +0.2 442,453 + -1.2 442,547 + +0.3 442,629 + -0.5 442,629 + -0.0 442,631 + +0.1 442,631 + +0.6 442,637 - -1.9 442,723 - -0.4 442,725 + +0.1
Or see this region's nucleotide sequence