Strain Fitness in Marinobacter adhaerens HP15 around HP15_481

Experiment: DinoMM minimal media with L-Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_480 and HP15_481 are separated by 55 nucleotidesHP15_481 and HP15_482 are separated by 211 nucleotides HP15_480: HP15_480 - 3-dehydroquinate synthase, at 490,964 to 492,058 _480 HP15_481: HP15_481 - sporulation domain protein, at 492,114 to 493,601 _481 HP15_482: HP15_482 - glutamate synthase subunit alpha, at 493,813 to 498,261 _482 Position (kb) 492 493 494Strain fitness (log2 ratio) -1 0 1 2 3at 492.064 kb on + strandat 492.150 kb on + strandat 492.171 kb on - strandat 492.296 kb on - strand, within HP15_481at 492.390 kb on + strand, within HP15_481at 492.416 kb on - strand, within HP15_481at 492.504 kb on - strand, within HP15_481at 492.577 kb on + strand, within HP15_481at 492.577 kb on + strand, within HP15_481at 492.577 kb on + strand, within HP15_481at 492.577 kb on + strand, within HP15_481at 492.577 kb on + strand, within HP15_481at 492.577 kb on + strand, within HP15_481at 492.577 kb on + strand, within HP15_481at 492.585 kb on - strand, within HP15_481at 492.585 kb on - strand, within HP15_481at 492.666 kb on + strand, within HP15_481at 492.688 kb on - strand, within HP15_481at 492.783 kb on + strand, within HP15_481at 492.827 kb on + strand, within HP15_481at 492.842 kb on + strand, within HP15_481at 492.884 kb on - strand, within HP15_481at 493.111 kb on - strand, within HP15_481at 493.169 kb on + strand, within HP15_481at 493.177 kb on - strand, within HP15_481at 493.359 kb on + strand, within HP15_481at 493.401 kb on - strand, within HP15_481at 493.401 kb on - strand, within HP15_481at 493.403 kb on - strand, within HP15_481at 493.429 kb on + strand, within HP15_481at 493.437 kb on - strand, within HP15_481at 493.456 kb on - strandat 493.456 kb on - strandat 493.572 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction DinoMM minimal media with L-Arginine
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492,064 + +1.3
492,150 + -1.7
492,171 - +0.1
492,296 - HP15_481 0.12 +0.2
492,390 + HP15_481 0.19 -0.3
492,416 - HP15_481 0.20 -0.6
492,504 - HP15_481 0.26 -0.7
492,577 + HP15_481 0.31 +1.5
492,577 + HP15_481 0.31 +0.7
492,577 + HP15_481 0.31 +0.5
492,577 + HP15_481 0.31 -1.1
492,577 + HP15_481 0.31 -0.1
492,577 + HP15_481 0.31 -0.9
492,577 + HP15_481 0.31 -0.9
492,585 - HP15_481 0.32 +0.1
492,585 - HP15_481 0.32 -0.5
492,666 + HP15_481 0.37 -1.0
492,688 - HP15_481 0.39 +0.8
492,783 + HP15_481 0.45 -0.7
492,827 + HP15_481 0.48 -0.2
492,842 + HP15_481 0.49 +1.1
492,884 - HP15_481 0.52 +1.1
493,111 - HP15_481 0.67 -1.6
493,169 + HP15_481 0.71 -0.4
493,177 - HP15_481 0.71 +0.5
493,359 + HP15_481 0.84 -0.8
493,401 - HP15_481 0.86 +1.6
493,401 - HP15_481 0.86 -1.1
493,403 - HP15_481 0.87 -0.1
493,429 + HP15_481 0.88 -0.4
493,437 - HP15_481 0.89 -0.3
493,456 - +1.2
493,456 - +2.9
493,572 + -1.2

Or see this region's nucleotide sequence