Strain Fitness in Marinobacter adhaerens HP15 around HP15_3330

Experiment: DinoMM minimal media with L-Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_3329 and HP15_3330 are separated by 169 nucleotidesHP15_3330 and HP15_3331 are separated by 28 nucleotides HP15_3329: HP15_3329 - NAD-dependent aldehyde dehydrogenase, at 3,488,828 to 3,490,273 _3329 HP15_3330: HP15_3330 - conserved hypothetical protein, at 3,490,443 to 3,491,081 _3330 HP15_3331: HP15_3331 - oxidoreductase, GMC family, at 3,491,110 to 3,492,699 _3331 Position (kb) 3490 3491 3492Strain fitness (log2 ratio) -2 -1 0 1 2at 3489.495 kb on + strand, within HP15_3329at 3489.495 kb on + strand, within HP15_3329at 3489.503 kb on - strand, within HP15_3329at 3489.516 kb on - strand, within HP15_3329at 3489.529 kb on - strand, within HP15_3329at 3489.593 kb on + strand, within HP15_3329at 3489.615 kb on + strand, within HP15_3329at 3489.727 kb on - strand, within HP15_3329at 3489.799 kb on + strand, within HP15_3329at 3489.799 kb on + strand, within HP15_3329at 3489.799 kb on + strand, within HP15_3329at 3489.976 kb on + strand, within HP15_3329at 3490.018 kb on + strand, within HP15_3329at 3490.042 kb on + strand, within HP15_3329at 3490.042 kb on + strand, within HP15_3329at 3490.044 kb on - strand, within HP15_3329at 3490.050 kb on - strand, within HP15_3329at 3490.050 kb on - strand, within HP15_3329at 3490.050 kb on - strand, within HP15_3329at 3490.065 kb on - strand, within HP15_3329at 3490.158 kb on - strandat 3490.233 kb on - strandat 3490.320 kb on + strandat 3490.365 kb on - strandat 3490.438 kb on + strandat 3490.586 kb on + strand, within HP15_3330at 3490.627 kb on + strand, within HP15_3330at 3490.670 kb on + strand, within HP15_3330at 3490.678 kb on - strand, within HP15_3330at 3490.826 kb on + strand, within HP15_3330at 3490.855 kb on - strand, within HP15_3330at 3490.857 kb on + strand, within HP15_3330at 3490.870 kb on - strand, within HP15_3330at 3490.941 kb on + strand, within HP15_3330at 3490.965 kb on - strand, within HP15_3330at 3491.027 kb on + strandat 3491.035 kb on - strandat 3491.035 kb on - strandat 3491.035 kb on - strandat 3491.248 kb on - strandat 3491.362 kb on + strand, within HP15_3331at 3491.370 kb on - strand, within HP15_3331at 3491.385 kb on - strand, within HP15_3331at 3491.440 kb on - strand, within HP15_3331at 3491.697 kb on - strand, within HP15_3331at 3491.704 kb on + strand, within HP15_3331at 3491.932 kb on - strand, within HP15_3331

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Per-strain Table

Position Strand Gene LocusTag Fraction DinoMM minimal media with L-Arginine
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3,489,495 + HP15_3329 0.46 -0.7
3,489,495 + HP15_3329 0.46 +1.2
3,489,503 - HP15_3329 0.47 +2.2
3,489,516 - HP15_3329 0.48 +0.2
3,489,529 - HP15_3329 0.48 -0.4
3,489,593 + HP15_3329 0.53 -1.1
3,489,615 + HP15_3329 0.54 +1.0
3,489,727 - HP15_3329 0.62 +1.5
3,489,799 + HP15_3329 0.67 -1.3
3,489,799 + HP15_3329 0.67 -0.1
3,489,799 + HP15_3329 0.67 -0.5
3,489,976 + HP15_3329 0.79 -1.3
3,490,018 + HP15_3329 0.82 +1.4
3,490,042 + HP15_3329 0.84 -0.4
3,490,042 + HP15_3329 0.84 +0.7
3,490,044 - HP15_3329 0.84 +1.4
3,490,050 - HP15_3329 0.85 -0.5
3,490,050 - HP15_3329 0.85 -0.0
3,490,050 - HP15_3329 0.85 +0.7
3,490,065 - HP15_3329 0.86 -0.6
3,490,158 - +0.9
3,490,233 - +0.8
3,490,320 + +0.4
3,490,365 - +1.0
3,490,438 + -0.4
3,490,586 + HP15_3330 0.22 +1.1
3,490,627 + HP15_3330 0.29 +1.4
3,490,670 + HP15_3330 0.36 -0.1
3,490,678 - HP15_3330 0.37 -0.4
3,490,826 + HP15_3330 0.60 -0.0
3,490,855 - HP15_3330 0.64 -2.2
3,490,857 + HP15_3330 0.65 +1.9
3,490,870 - HP15_3330 0.67 -0.1
3,490,941 + HP15_3330 0.78 -1.1
3,490,965 - HP15_3330 0.82 -1.4
3,491,027 + -0.6
3,491,035 - -0.9
3,491,035 - +1.0
3,491,035 - +0.6
3,491,248 - +0.6
3,491,362 + HP15_3331 0.16 -0.3
3,491,370 - HP15_3331 0.16 -0.5
3,491,385 - HP15_3331 0.17 -1.7
3,491,440 - HP15_3331 0.21 +1.9
3,491,697 - HP15_3331 0.37 +0.3
3,491,704 + HP15_3331 0.37 +1.5
3,491,932 - HP15_3331 0.52 -0.6

Or see this region's nucleotide sequence