Experiment: DinoMM minimal media with L-Arginine
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2682 and HP15_2683 are separated by 58 nucleotides HP15_2683 and HP15_2684 overlap by 1 nucleotides
HP15_2682: HP15_2682 - TRAP dicarboxylate transporter- DctP subunit, at 2,830,129 to 2,831,094
_2682
HP15_2683: HP15_2683 - DctQ (C4-dicarboxylate permease, small subunit), at 2,831,153 to 2,831,671
_2683
HP15_2684: HP15_2684 - TRAP-type C4-dicarboxylate transport system, large permease component, at 2,831,671 to 2,832,978
_2684
Position (kb)
2831
2832 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2830.176 kb on + strand at 2830.184 kb on - strand at 2830.186 kb on - strand at 2830.216 kb on - strand at 2830.296 kb on + strand, within HP15_2682 at 2830.522 kb on + strand, within HP15_2682 at 2830.533 kb on + strand, within HP15_2682 at 2830.533 kb on + strand, within HP15_2682 at 2830.533 kb on + strand, within HP15_2682 at 2830.533 kb on + strand, within HP15_2682 at 2830.533 kb on + strand, within HP15_2682 at 2830.541 kb on - strand, within HP15_2682 at 2830.541 kb on - strand, within HP15_2682 at 2830.541 kb on - strand, within HP15_2682 at 2830.541 kb on - strand, within HP15_2682 at 2830.541 kb on - strand, within HP15_2682 at 2830.541 kb on - strand, within HP15_2682 at 2830.541 kb on - strand, within HP15_2682 at 2830.541 kb on - strand, within HP15_2682 at 2830.541 kb on - strand, within HP15_2682 at 2830.543 kb on + strand, within HP15_2682 at 2830.558 kb on - strand, within HP15_2682 at 2830.564 kb on - strand, within HP15_2682 at 2830.574 kb on - strand, within HP15_2682 at 2830.597 kb on - strand, within HP15_2682 at 2830.656 kb on + strand, within HP15_2682 at 2830.759 kb on + strand, within HP15_2682 at 2830.800 kb on + strand, within HP15_2682 at 2831.069 kb on + strand at 2831.135 kb on + strand at 2831.150 kb on + strand at 2831.221 kb on - strand, within HP15_2683 at 2831.309 kb on + strand, within HP15_2683 at 2831.375 kb on + strand, within HP15_2683 at 2831.385 kb on + strand, within HP15_2683 at 2831.403 kb on - strand, within HP15_2683 at 2831.636 kb on - strand at 2831.646 kb on - strand at 2831.695 kb on + strand at 2831.927 kb on - strand, within HP15_2684 at 2831.927 kb on - strand, within HP15_2684 at 2831.985 kb on - strand, within HP15_2684 at 2831.985 kb on - strand, within HP15_2684 at 2832.080 kb on - strand, within HP15_2684 at 2832.080 kb on - strand, within HP15_2684 at 2832.080 kb on - strand, within HP15_2684 at 2832.119 kb on + strand, within HP15_2684 at 2832.127 kb on - strand, within HP15_2684 at 2832.200 kb on - strand, within HP15_2684 at 2832.216 kb on - strand, within HP15_2684 at 2832.258 kb on - strand, within HP15_2684 at 2832.324 kb on + strand, within HP15_2684 at 2832.327 kb on - strand, within HP15_2684 at 2832.385 kb on + strand, within HP15_2684 at 2832.388 kb on - strand, within HP15_2684 at 2832.416 kb on + strand, within HP15_2684 at 2832.481 kb on - strand, within HP15_2684 at 2832.516 kb on - strand, within HP15_2684 at 2832.564 kb on + strand, within HP15_2684
Per-strain Table
Position Strand Gene LocusTag Fraction DinoMM minimal media with L-Arginine remove 2,830,176 + +1.7 2,830,184 - -0.7 2,830,186 - +1.2 2,830,216 - -0.2 2,830,296 + HP15_2682 0.17 +1.5 2,830,522 + HP15_2682 0.41 -0.5 2,830,533 + HP15_2682 0.42 -0.2 2,830,533 + HP15_2682 0.42 -1.5 2,830,533 + HP15_2682 0.42 -1.5 2,830,533 + HP15_2682 0.42 -0.3 2,830,533 + HP15_2682 0.42 +0.3 2,830,541 - HP15_2682 0.43 -0.6 2,830,541 - HP15_2682 0.43 +1.8 2,830,541 - HP15_2682 0.43 +1.8 2,830,541 - HP15_2682 0.43 -0.7 2,830,541 - HP15_2682 0.43 +0.4 2,830,541 - HP15_2682 0.43 -0.4 2,830,541 - HP15_2682 0.43 +0.8 2,830,541 - HP15_2682 0.43 +1.7 2,830,541 - HP15_2682 0.43 -2.0 2,830,543 + HP15_2682 0.43 -0.9 2,830,558 - HP15_2682 0.44 +0.3 2,830,564 - HP15_2682 0.45 +1.0 2,830,574 - HP15_2682 0.46 +1.6 2,830,597 - HP15_2682 0.48 -0.2 2,830,656 + HP15_2682 0.55 +1.7 2,830,759 + HP15_2682 0.65 +1.3 2,830,800 + HP15_2682 0.69 -0.1 2,831,069 + -1.5 2,831,135 + -0.5 2,831,150 + -0.7 2,831,221 - HP15_2683 0.13 -0.5 2,831,309 + HP15_2683 0.30 +1.5 2,831,375 + HP15_2683 0.43 +1.5 2,831,385 + HP15_2683 0.45 +1.3 2,831,403 - HP15_2683 0.48 +0.1 2,831,636 - -0.2 2,831,646 - -0.7 2,831,695 + +1.6 2,831,927 - HP15_2684 0.20 -1.2 2,831,927 - HP15_2684 0.20 -0.8 2,831,985 - HP15_2684 0.24 -0.8 2,831,985 - HP15_2684 0.24 -0.4 2,832,080 - HP15_2684 0.31 -0.3 2,832,080 - HP15_2684 0.31 -0.9 2,832,080 - HP15_2684 0.31 -0.5 2,832,119 + HP15_2684 0.34 -0.7 2,832,127 - HP15_2684 0.35 +0.7 2,832,200 - HP15_2684 0.40 -0.1 2,832,216 - HP15_2684 0.42 +1.5 2,832,258 - HP15_2684 0.45 -0.0 2,832,324 + HP15_2684 0.50 +0.8 2,832,327 - HP15_2684 0.50 -0.7 2,832,385 + HP15_2684 0.55 -0.2 2,832,388 - HP15_2684 0.55 +1.0 2,832,416 + HP15_2684 0.57 -0.3 2,832,481 - HP15_2684 0.62 -2.2 2,832,516 - HP15_2684 0.65 -0.5 2,832,564 + HP15_2684 0.68 -0.8
Or see this region's nucleotide sequence