Strain Fitness in Marinobacter adhaerens HP15 around HP15_265

Experiment: DinoMM minimal media with L-Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_264 and HP15_265 overlap by 15 nucleotidesHP15_265 and HP15_266 are separated by 21 nucleotides HP15_264: HP15_264 - NADPH:quinone reductase and related Zn-dependent oxidoreductase, at 253,766 to 254,749 _264 HP15_265: HP15_265 - sodium/hydrogen exchanger family protein, at 254,735 to 256,612 _265 HP15_266: HP15_266 - UBA/THIF-type NAD/FAD binding protein, at 256,634 to 257,467 _266 Position (kb) 254 255 256 257Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 253.819 kb on - strandat 253.908 kb on + strand, within HP15_264at 253.908 kb on + strand, within HP15_264at 253.914 kb on + strand, within HP15_264at 253.922 kb on - strand, within HP15_264at 254.031 kb on + strand, within HP15_264at 254.039 kb on - strand, within HP15_264at 254.054 kb on - strand, within HP15_264at 254.111 kb on - strand, within HP15_264at 254.188 kb on - strand, within HP15_264at 254.257 kb on + strand, within HP15_264at 254.260 kb on - strand, within HP15_264at 254.318 kb on + strand, within HP15_264at 254.318 kb on + strand, within HP15_264at 254.411 kb on + strand, within HP15_264at 254.419 kb on + strand, within HP15_264at 254.427 kb on - strand, within HP15_264at 254.427 kb on - strand, within HP15_264at 254.438 kb on + strand, within HP15_264at 254.446 kb on - strand, within HP15_264at 254.477 kb on + strand, within HP15_264at 254.495 kb on + strand, within HP15_264at 254.512 kb on + strand, within HP15_264at 254.606 kb on - strand, within HP15_264at 254.674 kb on + strandat 254.689 kb on + strandat 254.806 kb on - strandat 254.830 kb on - strandat 254.833 kb on + strandat 254.841 kb on - strandat 254.843 kb on + strandat 254.932 kb on + strand, within HP15_265at 255.011 kb on - strand, within HP15_265at 255.011 kb on - strand, within HP15_265at 255.026 kb on + strand, within HP15_265at 255.034 kb on - strand, within HP15_265at 255.034 kb on - strand, within HP15_265at 255.058 kb on + strand, within HP15_265at 255.125 kb on - strand, within HP15_265at 255.241 kb on - strand, within HP15_265at 255.418 kb on - strand, within HP15_265at 255.418 kb on - strand, within HP15_265at 255.454 kb on + strand, within HP15_265at 255.475 kb on + strand, within HP15_265at 255.760 kb on + strand, within HP15_265at 255.779 kb on + strand, within HP15_265at 255.880 kb on + strand, within HP15_265at 255.925 kb on + strand, within HP15_265at 256.076 kb on + strand, within HP15_265at 256.081 kb on + strand, within HP15_265at 256.182 kb on - strand, within HP15_265at 256.194 kb on + strand, within HP15_265at 256.250 kb on + strand, within HP15_265at 256.263 kb on + strand, within HP15_265at 256.271 kb on - strand, within HP15_265at 256.271 kb on - strand, within HP15_265at 256.313 kb on + strand, within HP15_265at 256.326 kb on - strand, within HP15_265at 256.333 kb on + strand, within HP15_265at 256.333 kb on + strand, within HP15_265at 256.340 kb on - strand, within HP15_265at 256.392 kb on - strand, within HP15_265at 256.475 kb on + strandat 256.483 kb on - strandat 256.527 kb on + strandat 256.551 kb on - strandat 256.589 kb on + strandat 256.597 kb on - strandat 256.717 kb on + strandat 256.810 kb on + strand, within HP15_266at 256.918 kb on - strand, within HP15_266at 256.930 kb on + strand, within HP15_266at 256.936 kb on - strand, within HP15_266at 256.943 kb on + strand, within HP15_266at 257.016 kb on - strand, within HP15_266at 257.066 kb on + strand, within HP15_266at 257.074 kb on - strand, within HP15_266at 257.137 kb on - strand, within HP15_266at 257.332 kb on + strand, within HP15_266at 257.337 kb on + strand, within HP15_266at 257.356 kb on - strand, within HP15_266at 257.443 kb on - strandat 257.448 kb on - strandat 257.586 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction DinoMM minimal media with L-Arginine
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253,819 - +0.8
253,908 + HP15_264 0.14 -0.8
253,908 + HP15_264 0.14 +1.7
253,914 + HP15_264 0.15 +1.1
253,922 - HP15_264 0.16 -0.1
254,031 + HP15_264 0.27 -0.5
254,039 - HP15_264 0.28 +0.7
254,054 - HP15_264 0.29 -1.3
254,111 - HP15_264 0.35 +1.1
254,188 - HP15_264 0.43 +2.0
254,257 + HP15_264 0.50 -0.7
254,260 - HP15_264 0.50 -1.0
254,318 + HP15_264 0.56 +0.2
254,318 + HP15_264 0.56 +0.3
254,411 + HP15_264 0.66 +1.2
254,419 + HP15_264 0.66 -0.8
254,427 - HP15_264 0.67 +0.5
254,427 - HP15_264 0.67 -0.6
254,438 + HP15_264 0.68 -0.6
254,446 - HP15_264 0.69 +1.7
254,477 + HP15_264 0.72 +0.8
254,495 + HP15_264 0.74 +1.2
254,512 + HP15_264 0.76 -0.5
254,606 - HP15_264 0.85 -0.7
254,674 + +0.2
254,689 + +1.5
254,806 - -0.7
254,830 - -0.1
254,833 + +0.9
254,841 - -0.8
254,843 + +1.0
254,932 + HP15_265 0.10 -1.2
255,011 - HP15_265 0.15 +0.1
255,011 - HP15_265 0.15 +0.9
255,026 + HP15_265 0.15 -1.3
255,034 - HP15_265 0.16 -0.3
255,034 - HP15_265 0.16 +1.4
255,058 + HP15_265 0.17 +0.7
255,125 - HP15_265 0.21 -1.3
255,241 - HP15_265 0.27 +1.3
255,418 - HP15_265 0.36 +1.1
255,418 - HP15_265 0.36 -1.2
255,454 + HP15_265 0.38 -0.3
255,475 + HP15_265 0.39 -0.5
255,760 + HP15_265 0.55 -0.9
255,779 + HP15_265 0.56 +1.1
255,880 + HP15_265 0.61 -0.3
255,925 + HP15_265 0.63 -0.8
256,076 + HP15_265 0.71 -0.9
256,081 + HP15_265 0.72 +2.1
256,182 - HP15_265 0.77 -2.2
256,194 + HP15_265 0.78 +0.5
256,250 + HP15_265 0.81 -0.7
256,263 + HP15_265 0.81 +0.8
256,271 - HP15_265 0.82 -0.7
256,271 - HP15_265 0.82 +0.5
256,313 + HP15_265 0.84 -0.3
256,326 - HP15_265 0.85 -0.4
256,333 + HP15_265 0.85 -1.1
256,333 + HP15_265 0.85 +1.5
256,340 - HP15_265 0.85 -0.1
256,392 - HP15_265 0.88 -0.5
256,475 + +1.6
256,483 - +1.0
256,527 + -0.4
256,551 - -1.4
256,589 + -0.3
256,597 - +2.7
256,717 + -0.4
256,810 + HP15_266 0.21 +1.3
256,918 - HP15_266 0.34 -0.0
256,930 + HP15_266 0.35 -3.1
256,936 - HP15_266 0.36 +0.4
256,943 + HP15_266 0.37 -0.9
257,016 - HP15_266 0.46 -0.5
257,066 + HP15_266 0.52 -0.4
257,074 - HP15_266 0.53 -0.5
257,137 - HP15_266 0.60 +0.0
257,332 + HP15_266 0.84 -0.0
257,337 + HP15_266 0.84 -0.5
257,356 - HP15_266 0.87 +2.1
257,443 - -1.8
257,448 - +0.2
257,586 - +2.0

Or see this region's nucleotide sequence