Strain Fitness in Marinobacter adhaerens HP15 around HP15_1131

Experiment: DinoMM minimal media with L-Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_1130 and HP15_1131 are separated by 60 nucleotidesHP15_1131 and HP15_1132 are separated by 40 nucleotides HP15_1130: HP15_1130 - transporter, BCCT family protein, at 1,158,308 to 1,159,900 _1130 HP15_1131: HP15_1131 - alpha-L-glutamate ligase-like protein, at 1,159,961 to 1,160,869 _1131 HP15_1132: HP15_1132 - gonadoliberin III-related protein, at 1,160,910 to 1,162,427 _1132 Position (kb) 1159 1160 1161Strain fitness (log2 ratio) -2 -1 0 1 2at 1159.257 kb on - strand, within HP15_1130at 1159.267 kb on - strand, within HP15_1130at 1159.306 kb on + strand, within HP15_1130at 1159.326 kb on - strand, within HP15_1130at 1159.494 kb on + strand, within HP15_1130at 1159.646 kb on + strand, within HP15_1130at 1159.720 kb on + strand, within HP15_1130at 1159.736 kb on + strand, within HP15_1130at 1159.744 kb on - strandat 1159.758 kb on - strandat 1159.794 kb on + strandat 1159.807 kb on - strandat 1159.807 kb on - strandat 1159.896 kb on + strandat 1159.904 kb on - strandat 1160.007 kb on + strandat 1160.007 kb on + strandat 1160.015 kb on - strandat 1160.146 kb on + strand, within HP15_1131at 1160.159 kb on - strand, within HP15_1131at 1160.186 kb on + strand, within HP15_1131at 1160.491 kb on - strand, within HP15_1131at 1160.500 kb on + strand, within HP15_1131at 1160.501 kb on + strand, within HP15_1131at 1160.529 kb on - strand, within HP15_1131at 1160.589 kb on - strand, within HP15_1131at 1160.680 kb on - strand, within HP15_1131at 1160.859 kb on + strandat 1160.975 kb on - strandat 1161.014 kb on - strandat 1161.075 kb on - strand, within HP15_1132at 1161.076 kb on + strand, within HP15_1132at 1161.084 kb on - strand, within HP15_1132at 1161.192 kb on + strand, within HP15_1132at 1161.231 kb on + strand, within HP15_1132at 1161.306 kb on + strand, within HP15_1132at 1161.376 kb on - strand, within HP15_1132at 1161.524 kb on + strand, within HP15_1132at 1161.524 kb on + strand, within HP15_1132at 1161.571 kb on + strand, within HP15_1132at 1161.701 kb on + strand, within HP15_1132at 1161.709 kb on - strand, within HP15_1132at 1161.788 kb on + strand, within HP15_1132at 1161.854 kb on + strand, within HP15_1132at 1161.854 kb on + strand, within HP15_1132

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Per-strain Table

Position Strand Gene LocusTag Fraction DinoMM minimal media with L-Arginine
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1,159,257 - HP15_1130 0.60 -0.8
1,159,267 - HP15_1130 0.60 +1.5
1,159,306 + HP15_1130 0.63 -0.7
1,159,326 - HP15_1130 0.64 -0.6
1,159,494 + HP15_1130 0.74 +2.0
1,159,646 + HP15_1130 0.84 -0.4
1,159,720 + HP15_1130 0.89 -0.6
1,159,736 + HP15_1130 0.90 +1.4
1,159,744 - -0.2
1,159,758 - -1.1
1,159,794 + -1.1
1,159,807 - +0.6
1,159,807 - +1.3
1,159,896 + +0.2
1,159,904 - +0.4
1,160,007 + +0.7
1,160,007 + -1.3
1,160,015 - -0.8
1,160,146 + HP15_1131 0.20 +1.3
1,160,159 - HP15_1131 0.22 +0.7
1,160,186 + HP15_1131 0.25 +1.0
1,160,491 - HP15_1131 0.58 -0.0
1,160,500 + HP15_1131 0.59 +1.0
1,160,501 + HP15_1131 0.59 +1.6
1,160,529 - HP15_1131 0.62 +1.3
1,160,589 - HP15_1131 0.69 +1.6
1,160,680 - HP15_1131 0.79 +1.0
1,160,859 + +1.0
1,160,975 - +0.0
1,161,014 - +1.0
1,161,075 - HP15_1132 0.11 -0.8
1,161,076 + HP15_1132 0.11 +1.0
1,161,084 - HP15_1132 0.11 +0.7
1,161,192 + HP15_1132 0.19 +1.6
1,161,231 + HP15_1132 0.21 +0.2
1,161,306 + HP15_1132 0.26 +1.5
1,161,376 - HP15_1132 0.31 -0.2
1,161,524 + HP15_1132 0.40 +0.0
1,161,524 + HP15_1132 0.40 -2.0
1,161,571 + HP15_1132 0.44 -0.4
1,161,701 + HP15_1132 0.52 -0.9
1,161,709 - HP15_1132 0.53 -0.6
1,161,788 + HP15_1132 0.58 +1.6
1,161,854 + HP15_1132 0.62 +1.1
1,161,854 + HP15_1132 0.62 +1.5

Or see this region's nucleotide sequence