Experiment: D-Xylose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa1155 and SMa1156 are separated by 65 nucleotides SMa1156 and SMa1158 are separated by 109 nucleotides
SMa1155: SMa1155 - cation transport P-type ATPase, at 630,205 to 632,907
SMa1155
SMa1156: SMa1156 - alcohol dehydrogenase, at 632,973 to 634,046
SMa1156
SMa1158: SMa1158 - hypothetical protein, at 634,156 to 634,998
SMa1158
Position (kb) 632
633
634
635 Strain fitness (log2 ratio) -1
0
1
2 at 632.023 kb on + strand, within SMa1155 at 632.023 kb on + strand, within SMa1155 at 632.023 kb on + strand, within SMa1155 at 632.023 kb on + strand, within SMa1155 at 632.024 kb on - strand, within SMa1155 at 632.024 kb on - strand, within SMa1155 at 632.024 kb on - strand, within SMa1155 at 632.024 kb on - strand, within SMa1155 at 632.024 kb on - strand, within SMa1155 at 632.215 kb on - strand, within SMa1155 at 632.363 kb on + strand, within SMa1155 at 632.394 kb on - strand, within SMa1155 at 632.511 kb on - strand, within SMa1155 at 632.558 kb on - strand, within SMa1155 at 632.558 kb on - strand, within SMa1155 at 632.558 kb on - strand, within SMa1155 at 632.558 kb on - strand, within SMa1155 at 632.739 kb on + strand at 632.752 kb on + strand at 632.753 kb on - strand at 632.753 kb on - strand at 632.753 kb on - strand at 632.753 kb on - strand at 632.753 kb on - strand at 632.753 kb on - strand at 632.822 kb on + strand at 632.822 kb on + strand at 632.823 kb on - strand at 632.823 kb on - strand at 633.028 kb on + strand at 633.028 kb on + strand at 633.159 kb on - strand, within SMa1156 at 633.161 kb on + strand, within SMa1156 at 633.162 kb on - strand, within SMa1156 at 633.239 kb on + strand, within SMa1156 at 633.239 kb on + strand, within SMa1156 at 633.240 kb on - strand, within SMa1156 at 633.252 kb on - strand, within SMa1156 at 633.652 kb on + strand, within SMa1156 at 633.764 kb on + strand, within SMa1156 at 633.764 kb on + strand, within SMa1156 at 633.765 kb on - strand, within SMa1156 at 633.818 kb on - strand, within SMa1156 at 633.930 kb on + strand, within SMa1156 at 633.945 kb on - strand at 633.945 kb on - strand at 634.196 kb on - strand at 634.247 kb on + strand, within SMa1158 at 634.513 kb on + strand, within SMa1158 at 634.537 kb on + strand, within SMa1158 at 634.688 kb on - strand, within SMa1158 at 634.879 kb on - strand, within SMa1158 at 634.914 kb on + strand at 634.920 kb on - strand at 634.976 kb on - strand at 634.976 kb on - strand at 634.976 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Xylose (C) remove 632,023 + SMa1155 0.67 +0.6 632,023 + SMa1155 0.67 +0.2 632,023 + SMa1155 0.67 +0.5 632,023 + SMa1155 0.67 +0.6 632,024 - SMa1155 0.67 +0.3 632,024 - SMa1155 0.67 -0.8 632,024 - SMa1155 0.67 +1.0 632,024 - SMa1155 0.67 +1.1 632,024 - SMa1155 0.67 +0.8 632,215 - SMa1155 0.74 -0.2 632,363 + SMa1155 0.80 +0.5 632,394 - SMa1155 0.81 +0.2 632,511 - SMa1155 0.85 +0.4 632,558 - SMa1155 0.87 +0.2 632,558 - SMa1155 0.87 +2.3 632,558 - SMa1155 0.87 -0.4 632,558 - SMa1155 0.87 -0.5 632,739 + -0.0 632,752 + +0.0 632,753 - +1.0 632,753 - -0.8 632,753 - +0.0 632,753 - +0.1 632,753 - +0.6 632,753 - +0.9 632,822 + +0.5 632,822 + +0.2 632,823 - -0.8 632,823 - -0.5 633,028 + +0.5 633,028 + +0.5 633,159 - SMa1156 0.17 +0.6 633,161 + SMa1156 0.18 +0.2 633,162 - SMa1156 0.18 -0.0 633,239 + SMa1156 0.25 -0.2 633,239 + SMa1156 0.25 +1.1 633,240 - SMa1156 0.25 +0.6 633,252 - SMa1156 0.26 +0.9 633,652 + SMa1156 0.63 +1.2 633,764 + SMa1156 0.74 -0.1 633,764 + SMa1156 0.74 +0.6 633,765 - SMa1156 0.74 +0.5 633,818 - SMa1156 0.79 +0.2 633,930 + SMa1156 0.89 -0.8 633,945 - -0.5 633,945 - -0.3 634,196 - +0.1 634,247 + SMa1158 0.11 -0.4 634,513 + SMa1158 0.42 -0.2 634,537 + SMa1158 0.45 +0.3 634,688 - SMa1158 0.63 -0.3 634,879 - SMa1158 0.86 +0.5 634,914 + +0.0 634,920 - +0.1 634,976 - +0.5 634,976 - -0.5 634,976 - +0.7
Or see this region's nucleotide sequence