Strain Fitness in Marinobacter adhaerens HP15 around HP15_1356

Experiment: DinoMM minimal media with L-Histidine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_1355 and HP15_1356 overlap by 4 nucleotidesHP15_1356 and HP15_1357 are separated by 40 nucleotides HP15_1355: HP15_1355 - cell division protein FtsH, at 1,424,465 to 1,426,378 _1355 HP15_1356: HP15_1356 - conserved hypothetical protein, at 1,426,375 to 1,426,623 _1356 HP15_1357: HP15_1357 - gamma-glutamyltranspeptidase periplasmic precursor, at 1,426,664 to 1,428,427 _1357 Position (kb) 1426 1427Strain fitness (log2 ratio) -1 0 1at 1425.483 kb on - strand, within HP15_1355at 1425.483 kb on - strand, within HP15_1355at 1425.584 kb on - strand, within HP15_1355at 1425.667 kb on - strand, within HP15_1355at 1425.667 kb on - strand, within HP15_1355at 1425.672 kb on - strand, within HP15_1355at 1425.692 kb on + strand, within HP15_1355at 1425.836 kb on - strand, within HP15_1355at 1425.909 kb on + strand, within HP15_1355at 1425.975 kb on + strand, within HP15_1355at 1425.980 kb on + strand, within HP15_1355at 1425.993 kb on - strand, within HP15_1355at 1426.421 kb on + strand, within HP15_1356at 1426.469 kb on + strand, within HP15_1356at 1426.469 kb on + strand, within HP15_1356at 1426.477 kb on - strand, within HP15_1356at 1426.524 kb on + strand, within HP15_1356at 1426.532 kb on - strand, within HP15_1356at 1426.534 kb on + strand, within HP15_1356at 1426.534 kb on + strand, within HP15_1356at 1426.547 kb on - strand, within HP15_1356at 1427.089 kb on - strand, within HP15_1357at 1427.181 kb on + strand, within HP15_1357at 1427.189 kb on - strand, within HP15_1357at 1427.195 kb on - strand, within HP15_1357at 1427.208 kb on + strand, within HP15_1357at 1427.216 kb on - strand, within HP15_1357at 1427.236 kb on + strand, within HP15_1357at 1427.244 kb on - strand, within HP15_1357at 1427.287 kb on + strand, within HP15_1357at 1427.287 kb on + strand, within HP15_1357at 1427.397 kb on - strand, within HP15_1357at 1427.406 kb on - strand, within HP15_1357at 1427.414 kb on + strand, within HP15_1357at 1427.525 kb on + strand, within HP15_1357at 1427.609 kb on + strand, within HP15_1357

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Per-strain Table

Position Strand Gene LocusTag Fraction DinoMM minimal media with L-Histidine
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1,425,483 - HP15_1355 0.53 +1.3
1,425,483 - HP15_1355 0.53 -0.1
1,425,584 - HP15_1355 0.58 -0.2
1,425,667 - HP15_1355 0.63 -0.1
1,425,667 - HP15_1355 0.63 +0.5
1,425,672 - HP15_1355 0.63 -0.1
1,425,692 + HP15_1355 0.64 +0.6
1,425,836 - HP15_1355 0.72 +0.4
1,425,909 + HP15_1355 0.75 +0.3
1,425,975 + HP15_1355 0.79 +0.9
1,425,980 + HP15_1355 0.79 -0.5
1,425,993 - HP15_1355 0.80 -0.1
1,426,421 + HP15_1356 0.18 -1.1
1,426,469 + HP15_1356 0.38 +0.6
1,426,469 + HP15_1356 0.38 -0.8
1,426,477 - HP15_1356 0.41 -0.2
1,426,524 + HP15_1356 0.60 -1.1
1,426,532 - HP15_1356 0.63 +1.2
1,426,534 + HP15_1356 0.64 -0.2
1,426,534 + HP15_1356 0.64 -0.4
1,426,547 - HP15_1356 0.69 +0.9
1,427,089 - HP15_1357 0.24 +0.5
1,427,181 + HP15_1357 0.29 +0.1
1,427,189 - HP15_1357 0.30 +0.4
1,427,195 - HP15_1357 0.30 -1.2
1,427,208 + HP15_1357 0.31 +0.1
1,427,216 - HP15_1357 0.31 -1.2
1,427,236 + HP15_1357 0.32 -0.6
1,427,244 - HP15_1357 0.33 +0.3
1,427,287 + HP15_1357 0.35 -0.0
1,427,287 + HP15_1357 0.35 +0.7
1,427,397 - HP15_1357 0.42 +0.9
1,427,406 - HP15_1357 0.42 +0.3
1,427,414 + HP15_1357 0.43 -0.1
1,427,525 + HP15_1357 0.49 +0.1
1,427,609 + HP15_1357 0.54 +0.3

Or see this region's nucleotide sequence