Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2153

Experiment: Formate/Acetate-Sulfite (60/30-40 mM) + 0.1% Yeast Extract

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate/Acetate-Sulfite (60/30-40 mM) + 0.1% Yeast Extract
2,251,482	+		DVU2152	0.28	+0.9
2,251,539	+		DVU2152	0.34	-0.6
2,251,648	-		DVU2152	0.44	-0.6
2,251,668	-		DVU2152	0.46	+0.5
2,251,675	+		DVU2152	0.47	-0.3
2,251,683	-		DVU2152	0.48	-0.2
2,251,838	+		DVU2152	0.63	-0.0
2,251,838	+		DVU2152	0.63	+1.0
2,251,846	-		DVU2152	0.64	-0.5
2,251,852	+		DVU2152	0.64	+0.1
2,251,886	-		DVU2152	0.68	-0.1
2,251,901	+		DVU2152	0.69	-0.3
2,251,903	+		DVU2152	0.69	-0.4
2,251,909	-		DVU2152	0.70	-0.2
2,252,106	+		DVU2152	0.89	-2.0
2,252,176	+				+0.5
2,252,181	+				+1.4
2,252,181	+				-1.4
2,252,213	+				-0.8
2,252,295	-				+0.2
2,252,303	+				-0.4
2,252,407	+				+0.1
2,252,407	+				+0.1
2,252,415	+				+0.0
2,252,517	+				-0.1
2,252,531	-				-0.1
2,252,556	-				+0.1
2,252,582	-				+0.1
2,252,618	-				-0.0
2,252,808	+		DVU2153	0.15	-0.2
2,252,845	+		DVU2153	0.16	+0.1
2,252,856	+		DVU2153	0.16	-0.1
2,252,917	-		DVU2153	0.17	+0.8
2,252,928	+		DVU2153	0.18	+0.2
2,252,947	+		DVU2153	0.18	-0.0
2,252,988	+		DVU2153	0.19	+0.2
2,252,993	+		DVU2153	0.19	+1.0
2,252,993	+		DVU2153	0.19	-0.7
2,252,996	-		DVU2153	0.19	-0.0
2,253,001	-		DVU2153	0.19	+0.0
2,253,001	-		DVU2153	0.19	+1.0
2,253,001	-		DVU2153	0.19	-0.8
2,253,003	+		DVU2153	0.20	+0.5
2,253,018	-		DVU2153	0.20	+0.4
2,253,020	-		DVU2153	0.20	-0.3
2,253,120	+		DVU2153	0.22	-0.0
2,253,153	+		DVU2153	0.23	+0.2
2,253,186	+		DVU2153	0.24	+0.2
2,253,188	+		DVU2153	0.24	+0.2
2,253,196	-		DVU2153	0.24	-1.0
2,253,201	-		DVU2153	0.24	-0.2
2,253,207	+		DVU2153	0.25	-0.2
2,253,207	+		DVU2153	0.25	+0.1
2,253,215	-		DVU2153	0.25	+0.1
2,253,255	+		DVU2153	0.26	+1.0
2,253,313	-		DVU2153	0.27	-0.3
2,253,313	-		DVU2153	0.27	-0.2
2,253,326	-		DVU2153	0.27	+0.0
2,253,332	-		DVU2153	0.28	+0.7
2,253,332	-		DVU2153	0.28	+1.1
2,253,342	+		DVU2153	0.28	+0.9
2,253,364	-		DVU2153	0.28	+0.1
2,253,435	-		DVU2153	0.30	+0.4
2,253,689	+		DVU2153	0.36	-0.0
2,253,694	-		DVU2153	0.37	+0.2
2,253,775	+		DVU2153	0.39	+1.3
2,253,777	+		DVU2153	0.39	-0.1
2,253,842	-		DVU2153	0.40	-0.5
2,253,842	-		DVU2153	0.40	+0.2
2,253,872	+		DVU2153	0.41	-0.6
2,253,952	+		DVU2153	0.43	+0.2
2,253,952	-		DVU2153	0.43	-0.4
2,253,971	+		DVU2153	0.43	-1.9
2,254,021	-		DVU2153	0.45	-1.4
2,254,023	-		DVU2153	0.45	-0.1
2,254,029	+		DVU2153	0.45	-0.2
2,254,034	+		DVU2153	0.45	+0.1
2,254,037	-		DVU2153	0.45	-0.4
2,254,102	+		DVU2153	0.47	-0.1
2,254,107	+		DVU2153	0.47	-0.0
2,254,115	-		DVU2153	0.47	-0.6
2,254,129	+		DVU2153	0.47	+0.1
2,254,191	-		DVU2153	0.49	+0.6
2,254,247	-		DVU2153	0.50	-0.1
2,254,279	+		DVU2153	0.51	-2.0
2,254,380	-		DVU2153	0.54	-0.2
2,254,391	+		DVU2153	0.54	+0.3
2,254,615	+		DVU2153	0.59	+0.0
2,254,759	-		DVU2153	0.63	-0.2
2,254,788	+		DVU2153	0.64	-0.3
2,254,818	-		DVU2153	0.64	+0.1
2,254,922	+		DVU2153	0.67	-1.9
2,255,015	-		DVU2153	0.69	-0.1
2,255,020	+		DVU2153	0.69	+0.2
2,255,048	-		DVU2153	0.70	+1.8
2,255,112	-		DVU2153	0.72	-0.4
2,255,174	+		DVU2153	0.73	+0.3
2,255,203	-		DVU2153	0.74	-0.3
2,255,244	-		DVU2153	0.75	-0.2
2,255,292	-		DVU2153	0.76	+0.0
2,255,296	+		DVU2153	0.76	-0.1
2,255,310	+		DVU2153	0.77	-0.3
2,255,326	+		DVU2153	0.77	+0.4
2,255,328	+		DVU2153	0.77	-0.3
2,255,328	+		DVU2153	0.77	+0.9
2,255,328	+		DVU2153	0.77	-0.6
2,255,336	-		DVU2153	0.77	+0.9
2,255,336	-		DVU2153	0.77	-0.3
2,255,384	+		DVU2153	0.78	-0.0
2,255,402	+		DVU2153	0.79	-0.0
2,255,410	+		DVU2153	0.79	-0.0
2,255,426	+		DVU2153	0.79	-0.2
2,255,426	+		DVU2153	0.79	-0.0
2,255,426	+		DVU2153	0.79	-0.0
2,255,426	+		DVU2153	0.79	+0.0
2,255,456	-		DVU2153	0.80	+0.5
2,255,456	-		DVU2153	0.80	+0.1
2,255,550	-		DVU2153	0.83	-0.2
2,255,587	-		DVU2153	0.83	+0.4
2,255,587	-		DVU2153	0.83	-0.2
2,255,624	+		DVU2153	0.84	+1.5
2,255,624	+		DVU2153	0.84	+1.3
2,255,627	-		DVU2153	0.84	-0.2
2,255,627	-		DVU2153	0.84	-0.1
2,255,632	-		DVU2153	0.85	+0.1
2,255,632	-		DVU2153	0.85	+0.2
2,255,702	-		DVU2153	0.86	-0.3
2,255,751	+		DVU2153	0.88	-0.4
2,255,923	+				+1.0
2,255,928	+				-0.1
2,255,931	-				+0.4
2,255,960	+				-0.9
2,256,056	+				-0.2
2,256,211	+				+0.4
2,256,267	+				-0.3
2,256,277	-				+2.0
2,256,294	+		DVU2154	0.12	+0.8
2,256,294	+		DVU2154	0.12	-0.0
2,256,294	+		DVU2154	0.12	-0.3
2,256,299	+		DVU2154	0.13	+0.1
2,256,299	+		DVU2154	0.13	+0.1
2,256,302	-		DVU2154	0.13	+0.2
2,256,307	-		DVU2154	0.15	+0.4
2,256,307	-		DVU2154	0.15	-0.4
2,256,312	-		DVU2154	0.16	+0.5
2,256,401	-		DVU2154	0.37	+0.1
2,256,416	-		DVU2154	0.40	+1.0
2,256,511	-		DVU2154	0.62	-0.3
2,256,586	+		DVU2154	0.80	-0.5
2,256,614	+		DVU2154	0.87	-0.2
2,256,622	-		DVU2154	0.88	-0.1
2,256,638	+				-0.1
2,256,645	+				-2.4
2,256,676	-				+0.1
2,256,727	+		DVU2155	0.13	-0.2
2,256,733	-		DVU2155	0.15	-0.3
2,256,775	+		DVU2155	0.25	-0.3
2,256,813	+		DVU2155	0.34	-0.6
2,256,832	+		DVU2155	0.38	-0.3
2,256,843	+		DVU2155	0.41	-0.8
2,256,862	-		DVU2155	0.45	-0.6
2,256,876	-		DVU2155	0.48	-0.2
2,256,876	-		DVU2155	0.48	-0.2
2,256,925	+		DVU2155	0.60	-0.2
2,256,925	+		DVU2155	0.60	+0.1
2,256,933	-		DVU2155	0.62	+0.1
2,256,933	-		DVU2155	0.62	-0.3
2,257,037	+		DVU2155	0.86	-0.2
2,257,110	+				-0.8
2,257,110	-				-0.4
2,257,112	+				+1.2
2,257,118	-				+2.1
2,257,165	-				-0.2
2,257,242	-		DVU2156	0.18	+0.1
2,257,242	-		DVU2156	0.18	+0.4