Strain Fitness in Sinorhizobium meliloti 1021 around SM_b20056

Experiment: D-Mannitol (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSM_b20056 and SM_b20057 overlap by 4 nucleotides SM_b20056: SM_b20056 - ABC transporter substrate-binding protein, at 66,644 to 67,711 _b20056 SM_b20057: SM_b20057 - ABC transporter permease, at 67,708 to 68,751 _b20057 Position (kb) 66 67 68Strain fitness (log2 ratio) -1 0 1 2at 65.681 kb on + strandat 65.681 kb on + strandat 65.682 kb on - strandat 65.682 kb on - strandat 65.682 kb on - strandat 65.682 kb on - strandat 65.743 kb on + strandat 65.921 kb on - strandat 66.027 kb on + strandat 66.028 kb on - strandat 66.140 kb on - strandat 66.167 kb on - strandat 66.172 kb on + strandat 66.172 kb on + strandat 66.173 kb on - strandat 66.173 kb on - strandat 66.209 kb on + strandat 66.250 kb on + strandat 66.355 kb on + strandat 66.639 kb on + strandat 66.639 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Mannitol (C)
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65,681 + +0.4
65,681 + -0.2
65,682 - +0.2
65,682 - +0.1
65,682 - +0.5
65,682 - -0.1
65,743 + -0.2
65,921 - +0.3
66,027 + -0.2
66,028 - +0.4
66,140 - -0.1
66,167 - -0.3
66,172 + -0.3
66,172 + +0.1
66,173 - -0.6
66,173 - -0.5
66,209 + +0.7
66,250 + +0.6
66,355 + -0.0
66,639 + -0.6
66,639 + +2.4

Or see this region's nucleotide sequence