Strain Fitness in Marinobacter adhaerens HP15 around HP15_p187g169

Experiment: DinoMM minimal media with L-Histidine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_p187g169 and HP15_p187g170 are separated by 468 nucleotides HP15_p187g169: HP15_p187g169 - hypothetical protein, at 174,141 to 174,305 _p187g169 HP15_p187g170: HP15_p187g170 - initiator RepB protein, at 174,774 to 175,991 _p187g170 Position (kb) 174 175Strain fitness (log2 ratio) -2 -1 0 1 2 3at 173.176 kb on - strandat 173.262 kb on - strandat 173.298 kb on + strandat 173.308 kb on - strandat 173.329 kb on - strandat 173.431 kb on + strandat 173.514 kb on + strandat 173.519 kb on + strandat 173.521 kb on - strandat 173.522 kb on - strandat 173.527 kb on - strandat 173.535 kb on + strandat 173.565 kb on - strandat 173.649 kb on + strandat 173.649 kb on + strandat 173.649 kb on + strandat 173.649 kb on + strandat 173.649 kb on + strandat 173.657 kb on - strandat 173.657 kb on - strandat 173.659 kb on - strandat 173.661 kb on + strandat 173.662 kb on + strandat 173.669 kb on - strandat 173.669 kb on - strandat 173.723 kb on - strandat 173.759 kb on + strandat 173.834 kb on - strandat 173.854 kb on - strandat 173.860 kb on - strandat 173.860 kb on - strandat 173.862 kb on - strandat 173.935 kb on + strandat 174.003 kb on + strandat 174.003 kb on + strandat 174.003 kb on + strandat 174.004 kb on + strandat 174.051 kb on - strandat 174.098 kb on - strandat 174.109 kb on + strandat 174.118 kb on + strandat 174.120 kb on + strandat 174.192 kb on - strand, within HP15_p187g169at 174.192 kb on - strand, within HP15_p187g169at 174.225 kb on - strand, within HP15_p187g169at 174.236 kb on - strand, within HP15_p187g169at 174.267 kb on + strand, within HP15_p187g169at 174.287 kb on - strand, within HP15_p187g169at 174.288 kb on - strand, within HP15_p187g169at 174.292 kb on - strandat 174.317 kb on - strandat 174.317 kb on - strandat 174.341 kb on - strandat 174.341 kb on - strandat 174.342 kb on - strandat 174.344 kb on + strandat 174.372 kb on - strandat 174.442 kb on - strandat 174.451 kb on + strandat 174.459 kb on - strandat 174.459 kb on - strandat 174.460 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction DinoMM minimal media with L-Histidine
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173,176 - -0.3
173,262 - -1.9
173,298 + +0.1
173,308 - -0.0
173,329 - -0.2
173,431 + +0.3
173,514 + +2.1
173,519 + -0.2
173,521 - +3.1
173,522 - +0.7
173,527 - +0.2
173,535 + -0.5
173,565 - +0.3
173,649 + +0.1
173,649 + -0.8
173,649 + +0.1
173,649 + +0.5
173,649 + +0.2
173,657 - -0.1
173,657 - -0.2
173,659 - +0.1
173,661 + -0.0
173,662 + -0.9
173,669 - -0.1
173,669 - +0.9
173,723 - +0.3
173,759 + +0.6
173,834 - +1.8
173,854 - +0.8
173,860 - -1.7
173,860 - +0.2
173,862 - -0.9
173,935 + -0.1
174,003 + -0.2
174,003 + +1.4
174,003 + +0.0
174,004 + +0.1
174,051 - +1.3
174,098 - +0.7
174,109 + -0.4
174,118 + +0.7
174,120 + +0.7
174,192 - HP15_p187g169 0.31 +0.6
174,192 - HP15_p187g169 0.31 +0.1
174,225 - HP15_p187g169 0.51 +0.6
174,236 - HP15_p187g169 0.58 +0.4
174,267 + HP15_p187g169 0.76 +1.4
174,287 - HP15_p187g169 0.88 +0.1
174,288 - HP15_p187g169 0.89 +0.4
174,292 - +0.2
174,317 - -0.3
174,317 - +0.1
174,341 - -1.6
174,341 - -1.3
174,342 - -0.2
174,344 + +1.7
174,372 - +0.6
174,442 - +0.3
174,451 + +0.3
174,459 - +1.3
174,459 - +0.4
174,460 + -0.7

Or see this region's nucleotide sequence