Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3958

Experiment: BHIS with 5-Fluorouracil 0.1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with 5-Fluorouracil 0.1 mM
5,145,708	+				-1.5
5,145,851	+				+0.7
5,145,852	-				-3.1
5,145,878	+				+2.9
5,145,976	+				-1.5
5,146,070	-				-1.7
5,146,073	-				+3.4
5,146,083	+				+1.6
5,146,091	+				+2.1
5,146,106	+				-2.1
5,146,146	+				+0.3
5,146,162	+				+2.4
5,146,185	-				-0.0
5,146,207	-				+1.3
5,146,208	+				-1.9
5,146,234	-				+0.8
5,146,341	+				-1.8
5,146,342	-				+0.7
5,146,344	-				-3.2
5,146,370	+				-1.9
5,146,370	+				+2.4
5,146,371	-				-1.9
5,146,378	-				+0.1
5,146,492	-				+2.7
5,146,494	-				-0.9
5,146,496	-				+0.1
5,146,503	+				+3.7
5,146,504	-				-2.2
5,146,515	+				+2.1
5,146,535	+				-1.6
5,146,536	-				+1.5
5,146,560	-				+2.7
5,146,593	+				+0.1
5,146,628	-				+2.4
5,146,652	-				-2.6
5,146,732	-				-2.7
5,146,744	+				-1.9
5,146,752	+				-1.5
5,146,753	-				+0.8
5,146,753	-				+2.4
5,146,768	+				+0.7
5,146,769	-				-2.5
5,146,843	+				+0.1
5,146,858	-				+1.4
5,146,880	-				+1.7
5,146,922	+				+0.5
5,146,922	+				-0.9
5,146,923	-				+2.9
5,146,923	-				-1.2
5,146,926	+				+2.4
5,146,926	+				+0.7
5,146,926	+				+2.7
5,146,927	-				+0.1
5,146,927	-				+0.7
5,146,927	-				-0.5
5,146,953	+				-2.2
5,147,017	-		BT3958	0.11	+0.7
5,147,042	-		BT3958	0.12	+1.7
5,147,086	+		BT3958	0.13	-2.7
5,147,087	-		BT3958	0.13	+1.7
5,147,088	+		BT3958	0.13	-0.9
5,147,104	+		BT3958	0.14	+2.9
5,147,142	+		BT3958	0.15	-1.3
5,147,142	+		BT3958	0.15	+2.0
5,147,146	-		BT3958	0.15	-1.4
5,147,203	+		BT3958	0.17	+2.7
5,147,210	-		BT3958	0.17	+1.1
5,147,273	-		BT3958	0.19	-0.8
5,147,291	-				-1.5
5,147,334	+		BT3958	0.21	-0.3
5,147,334	+		BT3958	0.21	-1.3
5,147,334	+		BT3958	0.21	+1.2
5,147,334	+		BT3958	0.21	-3.0
5,147,335	-		BT3958	0.21	+2.7
5,147,335	-		BT3958	0.21	+0.1
5,147,335	-		BT3958	0.21	-0.5
5,147,335	-		BT3958	0.21	+2.4
5,147,335	-		BT3958	0.21	+0.1
5,147,344	-		BT3958	0.21	-2.7
5,147,353	+		BT3958	0.21	-1.5
5,147,361	+		BT3958	0.22	-1.5
5,147,470	+		BT3958	0.25	+2.1
5,147,471	-		BT3958	0.25	-3.0
5,147,476	+		BT3958	0.25	+1.7
5,147,477	-		BT3958	0.25	+3.1
5,147,501	-		BT3958	0.26	-2.8
5,147,507	-		BT3958	0.26	-2.2
5,147,510	-		BT3958	0.26	-2.5
5,147,519	-		BT3958	0.27	+2.1
5,147,519	-		BT3958	0.27	-1.7
5,147,523	+		BT3958	0.27	-0.6
5,147,525	+		BT3958	0.27	+0.1
5,147,525	+		BT3958	0.27	+0.9
5,147,537	+		BT3958	0.27	-0.9
5,147,537	+		BT3958	0.27	-4.4
5,147,540	-		BT3958	0.27	-0.5
5,147,572	-		BT3958	0.28	+2.9
5,147,603	+		BT3958	0.29	-1.9
5,147,656	+		BT3958	0.31	+2.0
5,147,657	-		BT3958	0.31	+0.5
5,147,691	+		BT3958	0.32	-2.2
5,147,695	+		BT3958	0.32	+1.4
5,147,724	-		BT3958	0.33	-2.9
5,147,726	+		BT3958	0.33	-0.9
5,147,728	+		BT3958	0.33	+0.1
5,147,769	-		BT3958	0.35	+0.1
5,147,776	+		BT3958	0.35	+2.4
5,147,777	-		BT3958	0.35	-0.3
5,147,802	-		BT3958	0.36	-2.7
5,147,802	-		BT3958	0.36	+0.1
5,147,804	-		BT3958	0.36	-1.5
5,147,873	-		BT3958	0.38	-1.7
5,147,878	+		BT3958	0.38	-1.5
5,147,978	-		BT3958	0.41	+3.2
5,147,983	+		BT3958	0.41	-0.8
5,148,149	-		BT3958	0.47	+2.3
5,148,149	-		BT3958	0.47	-1.8
5,148,170	-		BT3958	0.47	+0.7
5,148,189	-		BT3958	0.48	-0.9
5,148,238	-		BT3958	0.50	+0.1
5,148,238	-		BT3958	0.50	+2.1
5,148,275	+		BT3958	0.51	+2.7
5,148,278	-		BT3958	0.51	-2.7
5,148,278	-		BT3958	0.51	+2.4
5,148,287	-		BT3958	0.51	-3.1
5,148,329	-		BT3958	0.52	-1.2
5,148,382	-		BT3958	0.54	-1.2
5,148,382	-		BT3958	0.54	-0.9
5,148,413	+		BT3958	0.55	+0.1
5,148,430	+		BT3958	0.56	-2.2
5,148,455	-		BT3958	0.56	-2.5
5,148,485	+		BT3958	0.57	-0.7
5,148,530	-		BT3958	0.59	+0.1
5,148,604	+		BT3958	0.61	-3.0
5,148,605	-		BT3958	0.61	+0.2
5,148,644	+		BT3958	0.62	+1.1
5,148,645	-		BT3958	0.62	+1.7
5,148,650	-		BT3958	0.63	+1.5
5,148,661	+		BT3958	0.63	+2.1
5,148,673	-		BT3958	0.63	+2.7
5,148,673	-		BT3958	0.63	+2.2
5,148,673	-		BT3958	0.63	-1.1
5,148,714	+		BT3958	0.65	-0.9
5,148,715	-		BT3958	0.65	-1.1
5,148,715	-		BT3958	0.65	+1.5
5,148,733	-		BT3958	0.65	-2.6
5,148,884	-		BT3958	0.70	+0.1
5,148,913	+		BT3958	0.71	+1.4
5,148,913	+		BT3958	0.71	+1.8
5,148,914	-		BT3958	0.71	-2.1
5,149,108	-		BT3958	0.77	-0.1
5,149,112	+		BT3958	0.77	-2.7
5,149,177	-		BT3958	0.79	+1.3
5,149,266	-		BT3958	0.82	+0.1
5,149,266	-		BT3958	0.82	-0.9
5,149,275	+		BT3958	0.82	-1.7
5,149,291	-		BT3958	0.83	-1.1
5,149,332	+		BT3958	0.84	-0.3
5,149,371	+		BT3958	0.85	+0.1
5,149,453	+		BT3958	0.88	-0.9
5,149,454	-		BT3958	0.88	-1.4
5,149,471	+		BT3958	0.89	-2.5
5,149,533	+				+0.1
5,149,534	-				-0.5
5,149,534	-				+0.5
5,149,639	+				+0.1
5,149,720	-				-2.5
5,149,792	-				-2.7
5,149,792	-				+2.4
5,149,950	-				-0.2
5,150,035	-				+2.4
5,150,035	-				+1.7
5,150,114	-		BT3959	0.13	+2.1
5,150,144	+		BT3959	0.15	-1.5
5,150,144	+		BT3959	0.15	+2.9
5,150,145	-		BT3959	0.15	+3.1
5,150,187	-		BT3959	0.17	+1.1
5,150,304	-		BT3959	0.23	+1.1
5,150,399	-		BT3959	0.28	-0.0
5,150,402	-		BT3959	0.28	+2.9
5,150,407	-		BT3959	0.28	+3.4
5,150,468	-		BT3959	0.31	-1.3
5,150,468	-		BT3959	0.31	+0.8
5,150,471	+		BT3959	0.31	-1.3
5,150,472	-		BT3959	0.32	-0.9
5,150,472	-		BT3959	0.32	+0.6
5,150,472	-		BT3959	0.32	-1.7
5,150,494	+		BT3959	0.33	-0.6
5,150,495	-		BT3959	0.33	+0.8
5,150,495	-		BT3959	0.33	+2.1
5,150,495	-		BT3959	0.33	-1.3
5,150,496	+		BT3959	0.33	+3.2
5,150,540	+		BT3959	0.35	-1.5
5,150,541	-		BT3959	0.35	+2.3
5,150,566	+		BT3959	0.36	+2.0
5,150,670	-		BT3959	0.42	+1.1
5,150,714	-		BT3959	0.44	-1.5