Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2890

Experiment: BHIS with 5-Fluorouracil 0.1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with 5-Fluorouracil 0.1 mM
3,608,735	-		BT2889	0.11	-2.0
3,608,758	-		BT2889	0.14	-1.5
3,608,768	+		BT2889	0.15	+0.1
3,608,769	-		BT2889	0.15	+2.3
3,608,819	+		BT2889	0.21	+3.5
3,608,819	+		BT2889	0.21	-0.6
3,608,820	-		BT2889	0.21	+1.9
3,608,837	-		BT2889	0.23	+1.7
3,608,866	-		BT2889	0.26	+1.4
3,608,938	+		BT2889	0.34	+2.0
3,608,941	-		BT2889	0.34	-1.3
3,609,061	-		BT2889	0.48	+0.1
3,609,091	+		BT2889	0.51	-1.7
3,609,091	+		BT2889	0.51	+2.5
3,609,091	+		BT2889	0.51	-1.3
3,609,091	+		BT2889	0.51	-1.0
3,609,092	-		BT2889	0.52	+3.1
3,609,100	-		BT2889	0.52	-2.9
3,609,103	+		BT2889	0.53	+1.5
3,609,146	+		BT2889	0.58	+2.1
3,609,228	-		BT2889	0.67	-1.7
3,609,259	+		BT2889	0.70	-3.6
3,609,293	-		BT2889	0.74	-1.5
3,609,348	+		BT2889	0.80	+2.5
3,609,358	+		BT2889	0.82	+1.1
3,609,387	+		BT2889	0.85	-2.4
3,609,387	+		BT2889	0.85	-1.5
3,609,388	-		BT2889	0.85	-2.5
3,609,388	-		BT2889	0.85	+2.3
3,609,440	+				-0.9
3,609,440	+				+1.1
3,609,484	-				-2.1
3,609,552	-				-1.3
3,609,555	-				+1.6
3,609,590	-				+1.6
3,609,596	-				-2.4
3,609,628	+				-0.9
3,609,628	+				+2.1
3,609,637	+				-1.4
3,609,638	-				+0.5
3,609,659	-				-2.1
3,609,673	+				+3.4
3,609,717	+				+1.9
3,609,718	-				-3.0
3,609,783	+				+2.1
3,609,785	+				-1.9
3,609,875	-		BT2890	0.13	+4.9
3,609,888	+		BT2890	0.14	-2.5
3,609,888	+		BT2890	0.14	+1.5
3,609,893	-		BT2890	0.15	-1.2
3,609,893	-		BT2890	0.15	+0.7
3,609,893	-		BT2890	0.15	-1.6
3,609,893	-		BT2890	0.15	-1.6
3,609,893	-		BT2890	0.15	+0.9
3,609,911	-		BT2890	0.16	-0.7
3,609,936	-		BT2890	0.18	+1.1
3,609,940	-		BT2890	0.19	-3.0
3,609,982	+		BT2890	0.22	+1.5
3,609,983	-		BT2890	0.22	+0.7
3,610,000	+		BT2890	0.24	+2.5
3,610,001	-		BT2890	0.24	-0.7
3,610,020	+		BT2890	0.25	-0.3
3,610,043	-		BT2890	0.27	-3.0
3,610,072	+		BT2890	0.30	+2.3
3,610,073	-		BT2890	0.30	+3.4
3,610,076	+		BT2890	0.30	-0.2
3,610,076	+		BT2890	0.30	+0.1
3,610,077	-		BT2890	0.30	-1.1
3,610,119	-		BT2890	0.34	-1.5
3,610,151	+		BT2890	0.36	+3.1
3,610,151	+		BT2890	0.36	-1.4
3,610,182	+		BT2890	0.39	+2.9
3,610,193	+		BT2890	0.40	-1.3
3,610,194	-		BT2890	0.40	-2.3
3,610,198	-		BT2890	0.40	-1.3
3,610,198	-		BT2890	0.40	-2.6
3,610,201	+		BT2890	0.40	-2.1
3,610,201	+		BT2890	0.40	-1.2
3,610,261	+		BT2890	0.45	-1.5
3,610,262	-		BT2890	0.45	-0.9
3,610,285	+		BT2890	0.47	+2.9
3,610,405	+		BT2890	0.57	+2.1
3,610,435	-		BT2890	0.60	-0.6
3,610,443	+		BT2890	0.61	-0.6
3,610,443	+		BT2890	0.61	+1.5
3,610,444	-		BT2890	0.61	+1.1
3,610,492	+		BT2890	0.65	-0.2
3,610,511	+		BT2890	0.66	-2.6
3,610,511	+		BT2890	0.66	-3.6
3,610,511	+		BT2890	0.66	-1.7
3,610,513	+		BT2890	0.66	+1.2
3,610,531	+		BT2890	0.68	+2.3
3,610,533	+		BT2890	0.68	+2.5
3,610,533	+		BT2890	0.68	-1.4
3,610,533	+		BT2890	0.68	+1.7
3,610,546	-		BT2890	0.69	-1.0
3,610,602	-		BT2890	0.74	-1.9
3,610,605	+		BT2890	0.74	+0.7
3,610,606	-		BT2890	0.74	+1.6
3,610,612	+		BT2890	0.75	+0.9
3,610,613	-		BT2890	0.75	+2.9
3,610,616	+				-2.5
3,610,620	+		BT2890	0.75	-1.9
3,610,620	+		BT2890	0.75	-0.5
3,610,621	-		BT2890	0.76	-0.5
3,610,621	-		BT2890	0.76	-2.2
3,610,657	+		BT2890	0.79	-0.7
3,610,657	+		BT2890	0.79	-1.3
3,610,657	+		BT2890	0.79	+0.1
3,610,658	-		BT2890	0.79	-1.0
3,610,667	+		BT2890	0.79	+2.5
3,610,700	+		BT2890	0.82	+1.7
3,610,702	+		BT2890	0.82	+1.6
3,610,702	+		BT2890	0.82	-1.2
3,610,722	+		BT2890	0.84	-1.7
3,610,771	-		BT2890	0.88	-1.4
3,610,788	+		BT2890	0.90	-2.7
3,610,836	+				-1.6
3,610,836	+				-1.7
3,610,837	-				-2.7
3,610,837	-				+1.1
3,610,843	+				-0.5
3,610,843	+				-2.0
3,610,844	-				-1.0
3,610,848	+				-2.2
3,610,848	+				-2.2
3,610,848	+				-0.2
3,610,848	+				+1.4
3,610,848	+				-0.4
3,610,849	-				-2.7
3,610,903	+				-0.2
3,610,921	+				-2.4
3,611,056	+				-1.8
3,611,152	-				-3.3
3,611,199	-				-2.9
3,611,215	+		BT2891	0.13	-0.5
3,611,218	-		BT2891	0.14	-0.3
3,611,269	+		BT2891	0.35	-2.1
3,611,269	+		BT2891	0.35	-1.7
3,611,270	-		BT2891	0.36	+1.7
3,611,270	-		BT2891	0.36	+0.6
3,611,289	+		BT2891	0.44	+1.0
3,611,303	-		BT2891	0.49	+0.4
3,611,337	+		BT2891	0.63	-1.8
3,611,360	+		BT2891	0.73	-2.0
3,611,360	+		BT2891	0.73	+1.1
3,611,360	+		BT2891	0.73	-0.9
3,611,361	-		BT2891	0.73	-1.0
3,611,361	-		BT2891	0.73	+1.7
3,611,361	-		BT2891	0.73	-1.9
3,611,361	-		BT2891	0.73	+2.5
3,611,362	+		BT2891	0.74	+2.0
3,611,362	+		BT2891	0.74	+2.5
3,611,362	+		BT2891	0.74	+0.9
3,611,363	-		BT2891	0.74	-2.3
3,611,392	+		BT2891	0.86	+2.9
3,611,393	-		BT2891	0.86	-4.7
3,611,452	-				-2.1
3,611,458	+				-3.0
3,611,458	+				+1.3
3,611,500	+				-1.7
3,611,500	+				+0.6
3,611,516	-				+2.1
3,611,551	-				-1.9
3,611,578	-				+3.1
3,611,621	+				-0.4
3,611,621	+				-0.9
3,611,622	-				+3.3
3,611,622	-				+2.5
3,611,626	+				-1.4
3,611,644	-				+1.1
3,611,737	+				-1.9
3,611,738	-				+1.1
3,611,738	-				-0.6
3,611,752	-				+1.7
3,611,759	-				+2.1
3,611,784	-				-2.2
3,611,799	-				+1.1
3,611,799	-				-1.3
3,611,800	+				-1.7
3,611,800	+				+0.1
3,611,853	+				-1.2
3,611,854	-				-1.8
3,611,867	-				+0.6
3,611,873	-				+2.1
3,611,874	+				+2.7
3,611,874	+				-0.7
3,611,875	-				-1.6
3,611,875	-				+1.9
3,611,875	-				-0.1
3,611,883	+				+2.8