Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT0791

Experiment: BHIS with 5-Fluorouracil 0.1 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBT0790 and BT0791 are separated by 340 nucleotidesBT0791 and BT0792 are separated by 88 nucleotides BT0790: BT0790 - phosphomethylpyrimidine kinase (NCBI ptt file), at 979,495 to 980,331 BT0790 BT0791: BT0791 - conserved hypothetical protein (NCBI ptt file), at 980,672 to 981,403 BT0791 BT0792: BT0792 - xylulokinase (EC 2.7.1.17) (from data), at 981,492 to 982,985 BT0792 Position (kb) 980 981 982Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 979.721 kb on - strand, within BT0790at 979.737 kb on - strand, within BT0790at 979.742 kb on + strand, within BT0790at 979.765 kb on + strand, within BT0790at 979.925 kb on - strand, within BT0790at 980.018 kb on + strand, within BT0790at 980.240 kb on - strand, within BT0790at 980.412 kb on - strandat 980.773 kb on - strand, within BT0791at 980.805 kb on - strand, within BT0791at 980.837 kb on + strand, within BT0791at 980.837 kb on + strand, within BT0791at 980.838 kb on - strand, within BT0791at 980.875 kb on - strand, within BT0791at 980.875 kb on - strand, within BT0791at 980.984 kb on - strand, within BT0791at 981.153 kb on - strand, within BT0791at 981.184 kb on + strand, within BT0791at 981.185 kb on - strand, within BT0791at 981.251 kb on + strand, within BT0791at 981.306 kb on - strand, within BT0791at 981.309 kb on + strand, within BT0791at 981.310 kb on - strand, within BT0791at 981.388 kb on + strandat 981.405 kb on - strandat 981.409 kb on - strandat 981.411 kb on + strandat 981.419 kb on - strandat 981.422 kb on + strandat 981.729 kb on - strand, within BT0792at 981.760 kb on + strand, within BT0792at 981.794 kb on + strand, within BT0792at 981.956 kb on + strand, within BT0792at 982.271 kb on + strand, within BT0792at 982.272 kb on - strand, within BT0792at 982.297 kb on - strand, within BT0792

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Per-strain Table

Position Strand Gene LocusTag Fraction BHIS with 5-Fluorouracil 0.1 mM
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979,721 - BT0790 0.27 +1.7
979,737 - BT0790 0.29 +0.5
979,742 + BT0790 0.30 +0.1
979,765 + BT0790 0.32 -2.5
979,925 - BT0790 0.51 -1.0
980,018 + BT0790 0.62 -0.5
980,240 - BT0790 0.89 +1.5
980,412 - -1.8
980,773 - BT0791 0.14 -1.0
980,805 - BT0791 0.18 +0.5
980,837 + BT0791 0.23 +1.1
980,837 + BT0791 0.23 -3.1
980,838 - BT0791 0.23 -2.1
980,875 - BT0791 0.28 -1.7
980,875 - BT0791 0.28 +0.5
980,984 - BT0791 0.43 -3.2
981,153 - BT0791 0.66 -3.1
981,184 + BT0791 0.70 -2.8
981,185 - BT0791 0.70 +0.7
981,251 + BT0791 0.79 +0.1
981,306 - BT0791 0.87 -1.8
981,309 + BT0791 0.87 -2.1
981,310 - BT0791 0.87 -2.0
981,388 + -1.9
981,405 - -2.8
981,409 - -0.0
981,411 + -3.3
981,419 - +2.5
981,422 + -2.0
981,729 - BT0792 0.16 -2.5
981,760 + BT0792 0.18 -1.5
981,794 + BT0792 0.20 -0.5
981,956 + BT0792 0.31 -0.5
982,271 + BT0792 0.52 +1.3
982,272 - BT0792 0.52 +1.5
982,297 - BT0792 0.54 +1.8

Or see this region's nucleotide sequence