Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU3112

Experiment: Pyruvate (fermenting) with Na2S as sulfur source with Casaminos 0.2%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pyruvate (fermenting) with Na2S as sulfur source with Casaminos 0.2%
3,260,614	-				-0.9
3,260,614	-				+0.6
3,260,620	+				-0.3
3,260,628	-				+1.0
3,260,695	+				+1.3
3,260,722	+				-0.3
3,260,732	+		DVU3111	0.10	-1.3
3,260,805	-		DVU3111	0.19	-0.0
3,260,950	-		DVU3111	0.37	-1.4
3,261,022	-		DVU3111	0.46	-0.1
3,261,075	-		DVU3111	0.53	-1.0
3,261,207	-		DVU3111	0.69	-0.5
3,261,212	-		DVU3111	0.70	-0.2
3,261,279	-		DVU3111	0.78	-0.2
3,261,313	-		DVU3111	0.82	-0.0
3,261,377	+				+0.2
3,261,390	-				+0.4
3,261,397	+				+0.7
3,261,404	-				-0.3
3,261,430	-				+0.5
3,261,433	+				+0.0
3,261,435	-				+0.5
3,261,489	+				+0.4
3,261,497	-				-0.3
3,261,668	+		DVU3112	0.20	+1.1
3,261,668	+		DVU3112	0.20	-0.3
3,261,688	-		DVU3112	0.23	-0.9
3,261,737	-		DVU3112	0.29	-1.1
3,261,774	+		DVU3112	0.33	-1.0
3,261,774	+		DVU3112	0.33	-1.1
3,261,774	+		DVU3112	0.33	-0.9
3,261,774	+		DVU3112	0.33	-1.0
3,261,786	+		DVU3112	0.35	-1.1
3,261,863	-		DVU3112	0.45	-0.6
3,262,045	-		DVU3112	0.67	-1.3
3,262,088	+		DVU3112	0.73	+0.7