Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2528
Experiment: Pyruvate (fermenting) with Na2S as sulfur source with Casaminos 0.2%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Pyruvate (fermenting) with Na2S as sulfur source with Casaminos 0.2% |
|---|---|---|---|---|---|
| remove | |||||
| 2,638,353 | + | hynA-2 | DVU2526 | 0.79 | -1.3 |
| 2,638,353 | + | hynA-2 | DVU2526 | 0.79 | -0.1 |
| 2,638,353 | + | hynA-2 | DVU2526 | 0.79 | -1.9 |
| 2,638,361 | - | hynA-2 | DVU2526 | 0.80 | -1.1 |
| 2,638,361 | - | hynA-2 | DVU2526 | 0.80 | -0.2 |
| 2,638,419 | + | hynA-2 | DVU2526 | 0.83 | -1.2 |
| 2,638,444 | + | hynA-2 | DVU2526 | 0.85 | -0.2 |
| 2,638,574 | + | -0.3 | |||
| 2,638,574 | + | -0.3 | |||
| 2,638,574 | + | +0.2 | |||
| 2,638,574 | + | +0.7 | |||
| 2,638,579 | + | -0.1 | |||
| 2,638,688 | - | +0.0 | |||
| 2,638,714 | + | +0.1 | |||
| 2,639,345 | + | DVU2528 | 0.16 | +0.1 | |
| 2,639,467 | - | DVU2528 | 0.77 | -1.9 | |
| 2,639,521 | - | +0.3 |
Or see this region's nucleotide sequence