Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2161

Experiment: Pyruvate (fermenting) with Na2S as sulfur source with Casaminos 0.2%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pyruvate (fermenting) with Na2S as sulfur source with Casaminos 0.2%
2,261,581	+		DVU2159	0.49	-0.4
2,261,589	+		DVU2159	0.50	-0.3
2,261,627	+		DVU2159	0.54	-0.3
2,261,755	+		DVU2159	0.67	-0.1
2,261,755	+		DVU2159	0.67	-1.4
2,261,755	+		DVU2159	0.67	-0.1
2,261,763	-		DVU2159	0.68	-1.4
2,261,789	+		DVU2159	0.71	-1.5
2,261,797	-		DVU2159	0.72	+0.5
2,261,797	-		DVU2159	0.72	-0.1
2,261,820	+		DVU2159	0.74	+0.2
2,261,826	+		DVU2159	0.75	-0.7
2,261,826	+		DVU2159	0.75	-1.4
2,261,826	+		DVU2159	0.75	-0.0
2,261,895	+		DVU2159	0.82	-0.6
2,261,907	+		DVU2159	0.83	+1.1
2,261,930	-		DVU2159	0.86	+1.8
2,262,045	+				+0.2
2,262,045	+				-0.7
2,262,053	-				-0.4
2,262,131	+		DVU2160	0.10	-0.1
2,262,174	-		DVU2160	0.20	+0.1
2,262,195	-		DVU2160	0.24	+0.9
2,262,209	-		DVU2160	0.27	+0.1
2,262,292	+		DVU2160	0.45	-0.4
2,262,394	+		DVU2160	0.67	+0.1
2,262,394	+		DVU2160	0.67	+0.2
2,262,407	+		DVU2160	0.69	+0.0
2,262,463	+		DVU2160	0.81	-1.8
2,262,524	-				+0.2
2,262,524	-				-1.1
2,262,606	+				-0.7
2,262,699	+		DVU2161	0.22	-0.9
2,262,742	+		DVU2161	0.28	-0.3
2,262,742	+		DVU2161	0.28	+0.4
2,262,770	+		DVU2161	0.32	-0.6
2,262,778	-		DVU2161	0.33	-0.6
2,262,859	+		DVU2161	0.44	-0.0
2,262,883	+		DVU2161	0.47	-0.0
2,262,936	-		DVU2161	0.55	+1.6
2,262,988	-		DVU2161	0.62	-0.1
2,263,027	+		DVU2161	0.68	-2.2
2,263,155	-		DVU2161	0.86	-0.8
2,263,233	-				-0.3
2,263,234	+				-0.3
2,263,262	-				-1.0
2,263,268	+				-1.6
2,263,295	-		DVU2162	0.12	-0.1
2,263,474	+		DVU2162	0.66	+0.2
2,263,482	-		DVU2162	0.68	-0.6
2,263,494	+		DVU2162	0.72	-0.9
2,263,507	-		DVU2162	0.76	+0.3
2,263,507	-		DVU2162	0.76	+0.4
2,263,522	-		DVU2162	0.81	-0.0
2,263,565	-				+0.0
2,263,596	+				-0.1
2,263,792	+				-0.1
2,263,800	-				-0.5
2,263,803	+				+0.1
2,263,924	+		DVU2164	0.39	-0.2
2,263,932	-		DVU2164	0.41	-0.6
2,263,932	-		DVU2164	0.41	+0.6
2,264,029	+		DVU2164	0.65	-0.2
2,264,032	-		DVU2164	0.65	+1.0
2,264,039	+		DVU2164	0.67	-1.6
2,264,047	-		DVU2164	0.69	-0.2
2,264,047	-		DVU2164	0.69	-0.1
2,264,083	+		DVU2164	0.78	-0.2
2,264,199	+				-0.7