Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2062

Experiment: Pyruvate (fermenting) with Na2S as sulfur source with Casaminos 0.2%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pyruvate (fermenting) with Na2S as sulfur source with Casaminos 0.2%
2,137,236	+	pfkA	DVU2061	0.26	-0.1
2,137,238	+	pfkA	DVU2061	0.26	-0.1
2,137,361	-	pfkA	DVU2061	0.36	+1.4
2,137,426	+	pfkA	DVU2061	0.40	-0.2
2,137,426	+	pfkA	DVU2061	0.40	+0.1
2,137,444	-	pfkA	DVU2061	0.42	+0.1
2,137,503	-	pfkA	DVU2061	0.46	-0.5
2,137,566	-	pfkA	DVU2061	0.51	-0.2
2,137,647	+	pfkA	DVU2061	0.57	+1.2
2,137,757	+	pfkA	DVU2061	0.65	+0.6
2,137,814	+	pfkA	DVU2061	0.69	-1.4
2,137,837	+	pfkA	DVU2061	0.71	-1.1
2,137,863	-	pfkA	DVU2061	0.73	-0.2
2,137,868	-	pfkA	DVU2061	0.73	+0.4
2,137,875	+	pfkA	DVU2061	0.74	-0.7
2,137,930	+	pfkA	DVU2061	0.78	+0.1
2,137,940	+	pfkA	DVU2061	0.79	+0.5
2,137,948	-	pfkA	DVU2061	0.79	+0.7
2,137,987	+	pfkA	DVU2061	0.82	-0.5
2,138,007	-	pfkA	DVU2061	0.84	-0.3
2,139,600	+		DVU2062	0.39	+0.4
2,140,125	-		DVU2062	0.55	+0.5
2,140,711	-		DVU2062	0.72	+1.2
2,140,817	+		DVU2062	0.75	-0.2
2,140,827	+		DVU2062	0.75	-0.4
2,140,943	-		DVU2062	0.78	-1.2
2,141,055	+		DVU2062	0.81	+0.4
2,141,376	+				-0.7
2,141,408	+				+0.6
2,141,408	+				-0.6
2,141,431	+				+1.1
2,141,436	+				+1.9
2,141,439	-				-0.4
2,141,536	+				-0.5
2,141,566	+				-1.2
2,141,603	-				-1.3
2,141,625	+				+0.0
2,141,625	-				-0.4
2,141,888	+				-0.4
2,142,003	-		DVU2063	0.11	+2.0
2,142,495	-		DVU2063	0.27	-0.1
2,142,671	+		DVU2063	0.33	+1.2