Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU1904

Experiment: Pyruvate (fermenting) with Na2S as sulfur source with Casaminos 0.2%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pyruvate (fermenting) with Na2S as sulfur source with Casaminos 0.2%
1,979,973	-	mfd	DVU1903	0.74	-0.4
1,980,082	-	mfd	DVU1903	0.78	-0.3
1,980,084	+	mfd	DVU1903	0.78	+0.6
1,980,102	-	mfd	DVU1903	0.78	+0.4
1,980,104	-	mfd	DVU1903	0.78	-0.5
1,980,295	+	mfd	DVU1903	0.84	-1.0
1,980,388	-	mfd	DVU1903	0.86	-2.1
1,980,526	+				-1.1
1,980,545	-				+0.2
1,980,570	+				-0.5
1,980,572	+				-0.0
1,980,606	+				+0.2
1,980,632	+				+0.2
1,980,668	+				-0.1
1,980,676	-				-0.5
1,980,766	-				+0.8
1,980,810	+				-1.5
1,980,861	-				-1.2
1,981,031	+	cheW-2	DVU1904	0.19	-0.6
1,981,075	-	cheW-2	DVU1904	0.28	-1.6
1,981,093	-	cheW-2	DVU1904	0.32	-1.0
1,981,107	+	cheW-2	DVU1904	0.35	-0.5
1,981,199	+	cheW-2	DVU1904	0.54	-0.6
1,981,237	-	cheW-2	DVU1904	0.62	-0.3
1,981,287	-	cheW-2	DVU1904	0.73	-0.4
1,981,347	+	cheW-2	DVU1904	0.85	-3.9
1,981,399	+				-1.0
1,981,399	+				-1.0
1,981,399	+				-0.5
1,981,418	+				-1.3
1,981,426	-				+0.2
1,981,426	-				-0.7
1,981,492	-				-0.4
1,981,496	+				-0.3
1,981,547	+				+1.2
1,981,550	-				+1.1
1,981,677	-		DVU1905	0.16	-0.9
1,981,846	+				+0.4
1,981,948	-				-0.2
1,981,980	-				+0.3
1,982,063	-				+0.4
1,982,165	+				-0.4